Protein–RNA interactions for Protein: P78357

CNTNAP1, Contactin-associated protein 1, humanhuman

Predictions only

Length 1,384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1P78357 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
CNTNAP1P78357 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC26.23■■□□□ 1.79
CNTNAP1P78357 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC26.23■■□□□ 1.79
CNTNAP1P78357 EI24-211ENST00000534546 1544 ntTSL 2 BASIC26.23■■□□□ 1.79
CNTNAP1P78357 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
CNTNAP1P78357 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC26.22■■□□□ 1.79
CNTNAP1P78357 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC26.22■■□□□ 1.79
CNTNAP1P78357 AC007322.1-201ENST00000426983 750 ntBASIC26.22■■□□□ 1.79
CNTNAP1P78357 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC26.22■■□□□ 1.79
CNTNAP1P78357 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC26.22■■□□□ 1.79
CNTNAP1P78357 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
CNTNAP1P78357 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
CNTNAP1P78357 LINC00543-201ENST00000567234 1845 ntBASIC26.22■■□□□ 1.79
CNTNAP1P78357 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
CNTNAP1P78357 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC26.21■■□□□ 1.79
CNTNAP1P78357 RHEB-204ENST00000472642 900 ntTSL 3 BASIC26.21■■□□□ 1.79
CNTNAP1P78357 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC26.21■■□□□ 1.79
CNTNAP1P78357 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC26.21■■□□□ 1.79
CNTNAP1P78357 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
CNTNAP1P78357 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC26.21■■□□□ 1.79
CNTNAP1P78357 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC26.21■■□□□ 1.79
CNTNAP1P78357 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
CNTNAP1P78357 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
CNTNAP1P78357 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
CNTNAP1P78357 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC26.21■■□□□ 1.79
CNTNAP1P78357 CASP6-205ENST00000505486 538 ntTSL 4 BASIC26.2■■□□□ 1.79
CNTNAP1P78357 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
CNTNAP1P78357 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC26.2■■□□□ 1.79
CNTNAP1P78357 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
CNTNAP1P78357 DUX4L16-201ENST00000555130 1264 ntBASIC26.2■■□□□ 1.79
CNTNAP1P78357 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
CNTNAP1P78357 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC26.2■■□□□ 1.79
CNTNAP1P78357 AC004812.2-201ENST00000611079 2094 ntBASIC26.2■■□□□ 1.79
CNTNAP1P78357 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.78
CNTNAP1P78357 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC26.2■■□□□ 1.78
CNTNAP1P78357 GCSHP5-201ENST00000443090 522 ntBASIC26.2■■□□□ 1.78
CNTNAP1P78357 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC26.19■■□□□ 1.78
CNTNAP1P78357 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
CNTNAP1P78357 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC26.19■■□□□ 1.78
CNTNAP1P78357 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC26.19■■□□□ 1.78
CNTNAP1P78357 BX005040.4-201ENST00000637145 1518 ntBASIC26.19■■□□□ 1.78
CNTNAP1P78357 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC26.19■■□□□ 1.78
CNTNAP1P78357 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
CNTNAP1P78357 DUSP5P2-201ENST00000426873 1033 ntBASIC26.19■■□□□ 1.78
CNTNAP1P78357 RNA5SP413-201ENST00000516373 109 ntBASIC26.19■■□□□ 1.78
CNTNAP1P78357 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
CNTNAP1P78357 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
CNTNAP1P78357 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
CNTNAP1P78357 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC26.18■■□□□ 1.78
CNTNAP1P78357 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC26.18■■□□□ 1.78
CNTNAP1P78357 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC26.18■■□□□ 1.78
CNTNAP1P78357 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
CNTNAP1P78357 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
CNTNAP1P78357 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC26.18■■□□□ 1.78
CNTNAP1P78357 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
CNTNAP1P78357 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
CNTNAP1P78357 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC26.18■■□□□ 1.78
CNTNAP1P78357 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
CNTNAP1P78357 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
CNTNAP1P78357 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC26.17■■□□□ 1.78
CNTNAP1P78357 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC26.17■■□□□ 1.78
CNTNAP1P78357 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
CNTNAP1P78357 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
CNTNAP1P78357 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC26.17■■□□□ 1.78
CNTNAP1P78357 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC26.17■■□□□ 1.78
CNTNAP1P78357 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
CNTNAP1P78357 LINC01124-201ENST00000409786 2117 ntBASIC26.17■■□□□ 1.78
CNTNAP1P78357 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC26.17■■□□□ 1.78
CNTNAP1P78357 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC26.16■■□□□ 1.78
CNTNAP1P78357 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC26.16■■□□□ 1.78
CNTNAP1P78357 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC26.16■■□□□ 1.78
CNTNAP1P78357 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC26.16■■□□□ 1.78
CNTNAP1P78357 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC26.16■■□□□ 1.78
CNTNAP1P78357 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC26.16■■□□□ 1.78
CNTNAP1P78357 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC26.16■■□□□ 1.78
CNTNAP1P78357 H19-210ENST00000439725 1929 ntTSL 2 BASIC26.16■■□□□ 1.78
CNTNAP1P78357 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
CNTNAP1P78357 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC26.16■■□□□ 1.78
CNTNAP1P78357 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CNTNAP1P78357 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC26.15■■□□□ 1.78
CNTNAP1P78357 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC26.15■■□□□ 1.78
CNTNAP1P78357 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
CNTNAP1P78357 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CNTNAP1P78357 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CNTNAP1P78357 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC26.15■■□□□ 1.78
CNTNAP1P78357 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC26.15■■□□□ 1.78
CNTNAP1P78357 AC068587.7-201ENST00000641602 218 ntBASIC26.15■■□□□ 1.78
CNTNAP1P78357 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CNTNAP1P78357 AL353803.4-201ENST00000565882 1934 ntBASIC26.15■■□□□ 1.78
CNTNAP1P78357 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC26.14■■□□□ 1.78
CNTNAP1P78357 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC26.14■■□□□ 1.78
CNTNAP1P78357 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
CNTNAP1P78357 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC26.14■■□□□ 1.78
CNTNAP1P78357 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC26.14■■□□□ 1.77
CNTNAP1P78357 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC26.14■■□□□ 1.77
CNTNAP1P78357 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC26.14■■□□□ 1.77
CNTNAP1P78357 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC26.14■■□□□ 1.77
CNTNAP1P78357 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
CNTNAP1P78357 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC26.13■■□□□ 1.77
CNTNAP1P78357 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC26.13■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms