Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HIST1H3AP68431 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
HIST1H3AP68431 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.04■□□□□ 0.64
HIST1H3AP68431 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
HIST1H3AP68431 AC010525.1-201ENST00000585559 441 ntBASIC19.04■□□□□ 0.64
HIST1H3AP68431 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC19.04■□□□□ 0.64
HIST1H3AP68431 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.04■□□□□ 0.64
HIST1H3AP68431 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
HIST1H3AP68431 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.04■□□□□ 0.64
HIST1H3AP68431 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.04■□□□□ 0.64
HIST1H3AP68431 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HIST1H3AP68431 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HIST1H3AP68431 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
HIST1H3AP68431 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HIST1H3AP68431 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
HIST1H3AP68431 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19.03■□□□□ 0.64
HIST1H3AP68431 AC079089.2-201ENST00000531211 1277 ntBASIC19.03■□□□□ 0.64
HIST1H3AP68431 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
HIST1H3AP68431 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HIST1H3AP68431 LINC00565-201ENST00000562710 2331 ntBASIC19.03■□□□□ 0.64
HIST1H3AP68431 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.03■□□□□ 0.64
HIST1H3AP68431 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
HIST1H3AP68431 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.03■□□□□ 0.64
HIST1H3AP68431 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.03■□□□□ 0.64
HIST1H3AP68431 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
HIST1H3AP68431 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HIST1H3AP68431 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HIST1H3AP68431 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HIST1H3AP68431 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HIST1H3AP68431 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
HIST1H3AP68431 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HIST1H3AP68431 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.64
HIST1H3AP68431 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.02■□□□□ 0.64
HIST1H3AP68431 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC19.02■□□□□ 0.64
HIST1H3AP68431 AC131212.1-201ENST00000613771 668 ntBASIC19.02■□□□□ 0.64
HIST1H3AP68431 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC19.02■□□□□ 0.64
HIST1H3AP68431 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
HIST1H3AP68431 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HIST1H3AP68431 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
HIST1H3AP68431 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
HIST1H3AP68431 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HIST1H3AP68431 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
HIST1H3AP68431 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HIST1H3AP68431 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.01■□□□□ 0.63
HIST1H3AP68431 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HIST1H3AP68431 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HIST1H3AP68431 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HIST1H3AP68431 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HIST1H3AP68431 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC19.01■□□□□ 0.63
HIST1H3AP68431 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
HIST1H3AP68431 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HIST1H3AP68431 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
HIST1H3AP68431 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HIST1H3AP68431 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.01■□□□□ 0.63
HIST1H3AP68431 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HIST1H3AP68431 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HIST1H3AP68431 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
HIST1H3AP68431 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19■□□□□ 0.63
HIST1H3AP68431 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HIST1H3AP68431 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19■□□□□ 0.63
HIST1H3AP68431 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HIST1H3AP68431 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC19■□□□□ 0.63
HIST1H3AP68431 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC19■□□□□ 0.63
HIST1H3AP68431 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
HIST1H3AP68431 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
HIST1H3AP68431 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HIST1H3AP68431 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19■□□□□ 0.63
HIST1H3AP68431 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
HIST1H3AP68431 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HIST1H3AP68431 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19■□□□□ 0.63
HIST1H3AP68431 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HIST1H3AP68431 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
HIST1H3AP68431 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HIST1H3AP68431 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HIST1H3AP68431 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
HIST1H3AP68431 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HIST1H3AP68431 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC18.99■□□□□ 0.63
HIST1H3AP68431 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HIST1H3AP68431 AC010141.3-201ENST00000456659 717 ntBASIC18.99■□□□□ 0.63
HIST1H3AP68431 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HIST1H3AP68431 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC18.99■□□□□ 0.63
HIST1H3AP68431 MYB-221ENST00000527615 2381 ntTSL 5 BASIC18.99■□□□□ 0.63
HIST1H3AP68431 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC18.99■□□□□ 0.63
HIST1H3AP68431 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
HIST1H3AP68431 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HIST1H3AP68431 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
HIST1H3AP68431 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HIST1H3AP68431 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
HIST1H3AP68431 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HIST1H3AP68431 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HIST1H3AP68431 SLC47A1P1-202ENST00000449666 945 ntBASIC18.98■□□□□ 0.63
HIST1H3AP68431 AP005435.1-201ENST00000529293 1178 ntBASIC18.98■□□□□ 0.63
HIST1H3AP68431 AC087239.1-201ENST00000622671 572 ntBASIC18.98■□□□□ 0.63
HIST1H3AP68431 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
HIST1H3AP68431 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
HIST1H3AP68431 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HIST1H3AP68431 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC18.98■□□□□ 0.63
HIST1H3AP68431 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HIST1H3AP68431 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HIST1H3AP68431 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms