Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
VBP1P61758 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
VBP1P61758 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
VBP1P61758 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.48■□□□□ 0.71
VBP1P61758 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
VBP1P61758 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
VBP1P61758 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
VBP1P61758 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
VBP1P61758 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
VBP1P61758 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
VBP1P61758 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
VBP1P61758 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.47■□□□□ 0.71
VBP1P61758 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
VBP1P61758 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.47■□□□□ 0.71
VBP1P61758 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
VBP1P61758 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC19.47■□□□□ 0.71
VBP1P61758 ECEL1P2-201ENST00000461596 1295 ntBASIC19.47■□□□□ 0.71
VBP1P61758 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
VBP1P61758 METRNL-202ENST00000570778 967 ntTSL 5 BASIC19.47■□□□□ 0.71
VBP1P61758 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
VBP1P61758 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
VBP1P61758 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
VBP1P61758 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.47■□□□□ 0.71
VBP1P61758 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VBP1P61758 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VBP1P61758 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.46■□□□□ 0.71
VBP1P61758 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VBP1P61758 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
VBP1P61758 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
VBP1P61758 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
VBP1P61758 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
VBP1P61758 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
VBP1P61758 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VBP1P61758 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.46■□□□□ 0.71
VBP1P61758 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
VBP1P61758 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.46■□□□□ 0.71
VBP1P61758 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
VBP1P61758 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VBP1P61758 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VBP1P61758 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
VBP1P61758 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
VBP1P61758 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
VBP1P61758 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.46■□□□□ 0.71
VBP1P61758 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
VBP1P61758 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VBP1P61758 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
VBP1P61758 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
VBP1P61758 AL592295.1-201ENST00000400984 884 ntBASIC19.45■□□□□ 0.7
VBP1P61758 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
VBP1P61758 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
VBP1P61758 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
VBP1P61758 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.45■□□□□ 0.7
VBP1P61758 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VBP1P61758 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VBP1P61758 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.44■□□□□ 0.7
VBP1P61758 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
VBP1P61758 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
VBP1P61758 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VBP1P61758 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.44■□□□□ 0.7
VBP1P61758 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.44■□□□□ 0.7
VBP1P61758 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
VBP1P61758 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
VBP1P61758 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VBP1P61758 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.44■□□□□ 0.7
VBP1P61758 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC19.44■□□□□ 0.7
VBP1P61758 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
VBP1P61758 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
VBP1P61758 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
VBP1P61758 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
VBP1P61758 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.44■□□□□ 0.7
VBP1P61758 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.44■□□□□ 0.7
VBP1P61758 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
VBP1P61758 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
VBP1P61758 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VBP1P61758 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
VBP1P61758 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VBP1P61758 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VBP1P61758 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
VBP1P61758 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
VBP1P61758 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VBP1P61758 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
VBP1P61758 AC144652.1-201ENST00000609974 1624 ntBASIC19.43■□□□□ 0.7
VBP1P61758 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
VBP1P61758 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
VBP1P61758 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
VBP1P61758 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VBP1P61758 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.42■□□□□ 0.7
VBP1P61758 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VBP1P61758 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
VBP1P61758 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.42■□□□□ 0.7
VBP1P61758 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
VBP1P61758 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VBP1P61758 AC007029.1-201ENST00000604183 313 ntBASIC19.42■□□□□ 0.7
VBP1P61758 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VBP1P61758 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
VBP1P61758 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
VBP1P61758 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
VBP1P61758 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
VBP1P61758 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VBP1P61758 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 14 ms