Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SUMO3P55854 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SUMO3P55854 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SUMO3P55854 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SUMO3P55854 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
SUMO3P55854 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SUMO3P55854 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC19.74■□□□□ 0.75
SUMO3P55854 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.74■□□□□ 0.75
SUMO3P55854 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SUMO3P55854 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.74■□□□□ 0.75
SUMO3P55854 OR7E47P-201ENST00000546390 1422 ntBASIC19.74■□□□□ 0.75
SUMO3P55854 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.74■□□□□ 0.75
SUMO3P55854 AC080038.3-201ENST00000623346 1952 ntBASIC19.74■□□□□ 0.75
SUMO3P55854 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SUMO3P55854 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
SUMO3P55854 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SUMO3P55854 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.73■□□□□ 0.75
SUMO3P55854 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SUMO3P55854 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SUMO3P55854 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SUMO3P55854 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SUMO3P55854 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.73■□□□□ 0.75
SUMO3P55854 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.73■□□□□ 0.75
SUMO3P55854 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
SUMO3P55854 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SUMO3P55854 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SUMO3P55854 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.73■□□□□ 0.75
SUMO3P55854 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
SUMO3P55854 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SUMO3P55854 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
SUMO3P55854 TSPY26P-201ENST00000476365 1326 ntBASIC19.73■□□□□ 0.75
SUMO3P55854 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SUMO3P55854 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SUMO3P55854 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.72■□□□□ 0.75
SUMO3P55854 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SUMO3P55854 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.72■□□□□ 0.75
SUMO3P55854 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.72■□□□□ 0.75
SUMO3P55854 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SUMO3P55854 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
SUMO3P55854 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SUMO3P55854 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.72■□□□□ 0.75
SUMO3P55854 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.72■□□□□ 0.75
SUMO3P55854 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.72■□□□□ 0.75
SUMO3P55854 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SUMO3P55854 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SUMO3P55854 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.72■□□□□ 0.75
SUMO3P55854 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SUMO3P55854 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SUMO3P55854 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.72■□□□□ 0.75
SUMO3P55854 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SUMO3P55854 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SUMO3P55854 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SUMO3P55854 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
SUMO3P55854 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SUMO3P55854 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SUMO3P55854 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SUMO3P55854 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SUMO3P55854 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.71■□□□□ 0.75
SUMO3P55854 EBPL-204ENST00000378272 766 ntTSL 3 BASIC19.71■□□□□ 0.75
SUMO3P55854 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SUMO3P55854 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.71■□□□□ 0.75
SUMO3P55854 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
SUMO3P55854 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SUMO3P55854 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SUMO3P55854 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SUMO3P55854 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.71■□□□□ 0.75
SUMO3P55854 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
SUMO3P55854 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SUMO3P55854 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SUMO3P55854 LINC00526-201ENST00000581067 1875 ntBASIC19.71■□□□□ 0.75
SUMO3P55854 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SUMO3P55854 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
SUMO3P55854 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.74
SUMO3P55854 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SUMO3P55854 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
SUMO3P55854 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
SUMO3P55854 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.7■□□□□ 0.74
SUMO3P55854 MTURN-203ENST00000409688 843 ntTSL 2 BASIC19.7■□□□□ 0.74
SUMO3P55854 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.7■□□□□ 0.74
SUMO3P55854 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.7■□□□□ 0.74
SUMO3P55854 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.7■□□□□ 0.74
SUMO3P55854 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SUMO3P55854 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SUMO3P55854 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SUMO3P55854 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
SUMO3P55854 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.69■□□□□ 0.74
SUMO3P55854 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SUMO3P55854 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.69■□□□□ 0.74
SUMO3P55854 AL034346.1-201ENST00000568244 1277 ntBASIC19.69■□□□□ 0.74
SUMO3P55854 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.69■□□□□ 0.74
SUMO3P55854 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SUMO3P55854 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SUMO3P55854 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
SUMO3P55854 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.69■□□□□ 0.74
SUMO3P55854 AC092053.2-201ENST00000640557 1818 ntBASIC19.69■□□□□ 0.74
SUMO3P55854 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC19.69■□□□□ 0.74
SUMO3P55854 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.68■□□□□ 0.74
SUMO3P55854 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC19.68■□□□□ 0.74
SUMO3P55854 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SUMO3P55854 MIR572-201ENST00000384983 95 ntBASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms