Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 CREM-229ENST00000474362 1030 ntTSL 2 BASIC18.8■□□□□ 0.6
ATP1B3P54709 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC18.8■□□□□ 0.6
ATP1B3P54709 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC18.8■□□□□ 0.6
ATP1B3P54709 UNC93B8-201ENST00000511903 705 ntBASIC18.8■□□□□ 0.6
ATP1B3P54709 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC18.8■□□□□ 0.6
ATP1B3P54709 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATP1B3P54709 AC004687.1-201ENST00000579003 1625 ntBASIC18.8■□□□□ 0.6
ATP1B3P54709 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC18.8■□□□□ 0.6
ATP1B3P54709 AC139530.1-201ENST00000575312 1977 ntBASIC18.8■□□□□ 0.6
ATP1B3P54709 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATP1B3P54709 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.8■□□□□ 0.6
ATP1B3P54709 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC18.8■□□□□ 0.6
ATP1B3P54709 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATP1B3P54709 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC18.8■□□□□ 0.6
ATP1B3P54709 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATP1B3P54709 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATP1B3P54709 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ATP1B3P54709 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATP1B3P54709 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATP1B3P54709 AC080038.3-201ENST00000623346 1952 ntBASIC18.79■□□□□ 0.6
ATP1B3P54709 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ATP1B3P54709 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ATP1B3P54709 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC18.79■□□□□ 0.6
ATP1B3P54709 AL117332.1-201ENST00000622628 974 ntBASIC18.79■□□□□ 0.6
ATP1B3P54709 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATP1B3P54709 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC18.79■□□□□ 0.6
ATP1B3P54709 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATP1B3P54709 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATP1B3P54709 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATP1B3P54709 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATP1B3P54709 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATP1B3P54709 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ATP1B3P54709 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATP1B3P54709 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
ATP1B3P54709 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ATP1B3P54709 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
ATP1B3P54709 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC18.78■□□□□ 0.6
ATP1B3P54709 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC18.78■□□□□ 0.6
ATP1B3P54709 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ATP1B3P54709 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATP1B3P54709 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
ATP1B3P54709 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATP1B3P54709 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
ATP1B3P54709 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ATP1B3P54709 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
ATP1B3P54709 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
ATP1B3P54709 KRT16P3-201ENST00000439127 1283 ntBASIC18.77■□□□□ 0.6
ATP1B3P54709 AK3-203ENST00000447596 705 ntTSL 2 BASIC18.77■□□□□ 0.6
ATP1B3P54709 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC18.77■□□□□ 0.6
ATP1B3P54709 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ATP1B3P54709 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
ATP1B3P54709 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
ATP1B3P54709 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ATP1B3P54709 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
ATP1B3P54709 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
ATP1B3P54709 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ATP1B3P54709 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ATP1B3P54709 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC18.76■□□□□ 0.59
ATP1B3P54709 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ATP1B3P54709 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ATP1B3P54709 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ATP1B3P54709 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
ATP1B3P54709 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ATP1B3P54709 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ATP1B3P54709 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC18.76■□□□□ 0.59
ATP1B3P54709 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
ATP1B3P54709 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ATP1B3P54709 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
ATP1B3P54709 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ATP1B3P54709 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC18.76■□□□□ 0.59
ATP1B3P54709 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC18.76■□□□□ 0.59
ATP1B3P54709 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ATP1B3P54709 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ATP1B3P54709 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ATP1B3P54709 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
ATP1B3P54709 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
ATP1B3P54709 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
ATP1B3P54709 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
ATP1B3P54709 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.75■□□□□ 0.59
ATP1B3P54709 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ATP1B3P54709 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ATP1B3P54709 C11orf96-202ENST00000528572 1834 ntBASIC18.75■□□□□ 0.59
ATP1B3P54709 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ATP1B3P54709 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ATP1B3P54709 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ATP1B3P54709 OR2A1-AS1-204ENST00000470435 602 ntBASIC18.75■□□□□ 0.59
ATP1B3P54709 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC18.75■□□□□ 0.59
ATP1B3P54709 AC241377.3-202ENST00000626088 1088 ntBASIC18.75■□□□□ 0.59
ATP1B3P54709 AC241585.3-202ENST00000628937 1088 ntBASIC18.75■□□□□ 0.59
ATP1B3P54709 AC245100.8-202ENST00000629247 1058 ntBASIC18.75■□□□□ 0.59
ATP1B3P54709 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC18.75■□□□□ 0.59
ATP1B3P54709 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ATP1B3P54709 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
ATP1B3P54709 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC18.74■□□□□ 0.59
ATP1B3P54709 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ATP1B3P54709 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
ATP1B3P54709 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
ATP1B3P54709 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
ATP1B3P54709 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC18.74■□□□□ 0.59
ATP1B3P54709 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms