Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC21.93■■□□□ 1.1
LIMK2P53671 GRAMD4P4-201ENST00000613563 1115 ntBASIC21.93■■□□□ 1.1
LIMK2P53671 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
LIMK2P53671 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.92■■□□□ 1.1
LIMK2P53671 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
LIMK2P53671 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC21.92■■□□□ 1.1
LIMK2P53671 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
LIMK2P53671 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21.92■■□□□ 1.1
LIMK2P53671 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC21.92■■□□□ 1.1
LIMK2P53671 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.92■■□□□ 1.1
LIMK2P53671 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
LIMK2P53671 AC099791.2-201ENST00000605725 427 ntBASIC21.92■■□□□ 1.1
LIMK2P53671 AL136967.2-201ENST00000623968 743 ntBASIC21.92■■□□□ 1.1
LIMK2P53671 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
LIMK2P53671 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
LIMK2P53671 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC21.92■■□□□ 1.1
LIMK2P53671 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
LIMK2P53671 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
LIMK2P53671 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
LIMK2P53671 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
LIMK2P53671 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
LIMK2P53671 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
LIMK2P53671 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC21.91■■□□□ 1.1
LIMK2P53671 HYI-206ENST00000372434 1025 ntTSL 5 BASIC21.91■■□□□ 1.1
LIMK2P53671 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
LIMK2P53671 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC21.91■■□□□ 1.1
LIMK2P53671 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
LIMK2P53671 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC21.91■■□□□ 1.1
LIMK2P53671 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC21.91■■□□□ 1.1
LIMK2P53671 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
LIMK2P53671 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
LIMK2P53671 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
LIMK2P53671 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
LIMK2P53671 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.9■■□□□ 1.1
LIMK2P53671 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
LIMK2P53671 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.9■■□□□ 1.1
LIMK2P53671 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
LIMK2P53671 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.9■■□□□ 1.1
LIMK2P53671 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
LIMK2P53671 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC21.9■■□□□ 1.1
LIMK2P53671 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
LIMK2P53671 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
LIMK2P53671 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
LIMK2P53671 SERBP1P1-201ENST00000396021 1160 ntBASIC21.9■■□□□ 1.1
LIMK2P53671 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC21.9■■□□□ 1.1
LIMK2P53671 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC21.9■■□□□ 1.1
LIMK2P53671 AF213884.3-201ENST00000563833 479 ntBASIC21.9■■□□□ 1.1
LIMK2P53671 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
LIMK2P53671 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
LIMK2P53671 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.9■■□□□ 1.1
LIMK2P53671 C17orf82-201ENST00000623772 1530 ntBASIC21.9■■□□□ 1.1
LIMK2P53671 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
LIMK2P53671 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.89■■□□□ 1.1
LIMK2P53671 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
LIMK2P53671 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC21.89■■□□□ 1.1
LIMK2P53671 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
LIMK2P53671 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.1
LIMK2P53671 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC21.89■■□□□ 1.09
LIMK2P53671 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
LIMK2P53671 AC004687.1-201ENST00000579003 1625 ntBASIC21.89■■□□□ 1.09
LIMK2P53671 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
LIMK2P53671 MIR939-201ENST00000401314 82 ntBASIC21.89■■□□□ 1.09
LIMK2P53671 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
LIMK2P53671 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
LIMK2P53671 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
LIMK2P53671 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC21.89■■□□□ 1.09
LIMK2P53671 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC21.89■■□□□ 1.09
LIMK2P53671 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
LIMK2P53671 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC21.89■■□□□ 1.09
LIMK2P53671 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.89■■□□□ 1.09
LIMK2P53671 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
LIMK2P53671 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
LIMK2P53671 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
LIMK2P53671 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
LIMK2P53671 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.88■■□□□ 1.09
LIMK2P53671 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
LIMK2P53671 AC007375.3-201ENST00000600936 2314 ntBASIC21.88■■□□□ 1.09
LIMK2P53671 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
LIMK2P53671 PTMA-205ENST00000410064 814 ntTSL 2 BASIC21.88■■□□□ 1.09
LIMK2P53671 AP001330.3-201ENST00000520123 633 ntBASIC21.88■■□□□ 1.09
LIMK2P53671 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
LIMK2P53671 MIR4767-201ENST00000582827 78 ntBASIC21.88■■□□□ 1.09
LIMK2P53671 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
LIMK2P53671 AL138724.1-201ENST00000606771 1088 ntBASIC21.88■■□□□ 1.09
LIMK2P53671 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC21.88■■□□□ 1.09
LIMK2P53671 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC21.88■■□□□ 1.09
LIMK2P53671 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
LIMK2P53671 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
LIMK2P53671 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
LIMK2P53671 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
LIMK2P53671 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
LIMK2P53671 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
LIMK2P53671 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC21.87■■□□□ 1.09
LIMK2P53671 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC21.87■■□□□ 1.09
LIMK2P53671 PTCHD3P2-201ENST00000424937 1205 ntBASIC21.87■■□□□ 1.09
LIMK2P53671 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.87■■□□□ 1.09
LIMK2P53671 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
LIMK2P53671 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
LIMK2P53671 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
LIMK2P53671 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms