Protein–RNA interactions for Protein: P53044

UFD1, Ubiquitin fusion degradation protein 1, yeastyeast

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UFD1P53044 WRS1YOL097C 1299 nt3.28□□□□□ -1.88
UFD1P53044 VPS21YOR089C 633 nt3.28□□□□□ -1.88
UFD1P53044 YGR027W-BYGR027W-B 5268 nt3.28□□□□□ -1.88
UFD1P53044 YLR227W-BYLR227W-B 5268 nt3.28□□□□□ -1.88
UFD1P53044 YPR158C-DYPR158C-D 5268 nt3.28□□□□□ -1.88
UFD1P53044 FLO9YAL063C 3969 nt3.28□□□□□ -1.88
UFD1P53044 ZDS2YML109W 2829 nt3.28□□□□□ -1.88
UFD1P53044 ARO1YDR127W 4767 nt3.28□□□□□ -1.88
UFD1P53044 GWT1YJL091C 1473 nt3.28□□□□□ -1.88
UFD1P53044 YLR352WYLR352W 2424 nt3.28□□□□□ -1.89
UFD1P53044 LOS1YKL205W 3303 nt3.27□□□□□ -1.89
UFD1P53044 SRO9YCL037C 1305 nt3.27□□□□□ -1.89
UFD1P53044 YLR177WYLR177W 1887 nt3.27□□□□□ -1.89
UFD1P53044 YCR101CYCR101C 549 nt3.27□□□□□ -1.89
UFD1P53044 FAD1YDL045C 921 nt3.27□□□□□ -1.89
UFD1P53044 SLX8YER116C 825 nt3.27□□□□□ -1.89
UFD1P53044 IRC6YFR043C 714 nt3.27□□□□□ -1.89
UFD1P53044 SCL1YGL011C 759 nt3.27□□□□□ -1.89
UFD1P53044 YJR096WYJR096W 849 nt3.27□□□□□ -1.89
UFD1P53044 MET16YPR167C 786 nt3.27□□□□□ -1.89
UFD1P53044 NTA1YJR062C 1374 nt3.26□□□□□ -1.89
UFD1P53044 SPO1YNL012W 1896 nt3.26□□□□□ -1.89
UFD1P53044 APN2YBL019W 1563 nt3.26□□□□□ -1.89
UFD1P53044 YMR018WYMR018W 1545 nt3.26□□□□□ -1.89
UFD1P53044 DIN7YDR263C 1293 nt3.26□□□□□ -1.89
UFD1P53044 YHP1YDR451C 1062 nt3.26□□□□□ -1.89
UFD1P53044 YFL065CYFL065C 309 nt3.26□□□□□ -1.89
UFD1P53044 REH1YLR387C 1299 nt3.26□□□□□ -1.89
UFD1P53044 ERD2YBL040C 660 nt3.26□□□□□ -1.89
UFD1P53044 SWP82YFL049W 1872 nt3.26□□□□□ -1.89
UFD1P53044 POL1YNL102W 4407 nt3.25□□□□□ -1.89
UFD1P53044 PHO87YCR037C 2772 nt3.25□□□□□ -1.89
UFD1P53044 ALE1YOR175C 1860 nt3.25□□□□□ -1.89
UFD1P53044 PPQ1YPL179W 1650 nt3.25□□□□□ -1.89
UFD1P53044 STE14YDR410C 720 nt3.25□□□□□ -1.89
UFD1P53044 SDT1YGL224C 843 nt3.25□□□□□ -1.89
UFD1P53044 YKT6YKL196C 603 nt3.25□□□□□ -1.89
UFD1P53044 YLR049CYLR049C 1287 nt3.25□□□□□ -1.89
UFD1P53044 GCD7YLR291C 1146 nt3.25□□□□□ -1.89
UFD1P53044 BLS1YLR408C 369 nt3.25□□□□□ -1.89
UFD1P53044 TVP18YMR071C 504 nt3.25□□□□□ -1.89
UFD1P53044 YOL024WYOL024W 519 nt3.25□□□□□ -1.89
UFD1P53044 AIM21YIR003W 2040 nt3.25□□□□□ -1.89
UFD1P53044 ERG5YMR015C 1617 nt3.25□□□□□ -1.89
UFD1P53044 UBP10YNL186W 2379 nt3.25□□□□□ -1.89
UFD1P53044 DAN4YJR151C 3486 nt3.24□□□□□ -1.89
UFD1P53044 GEM1YAL048C 1989 nt3.24□□□□□ -1.89
UFD1P53044 MRPL11YDL202W 750 nt3.24□□□□□ -1.89
UFD1P53044 YGR204C-AYGR204C-A 114 nt3.24□□□□□ -1.89
UFD1P53044 BNA1YJR025C 534 nt3.24□□□□□ -1.89
UFD1P53044 YKL177WYKL177W 339 nt3.24□□□□□ -1.89
UFD1P53044 FOL3YMR113W 1284 nt3.24□□□□□ -1.89
UFD1P53044 AIM39YOL053W 1188 nt3.24□□□□□ -1.89
UFD1P53044 RPL18AYOL120C 561 nt3.24□□□□□ -1.89
UFD1P53044 YBR255C-AYBR255C-A 363 nt3.24□□□□□ -1.89
UFD1P53044 RTK1YDL025C 1863 nt3.24□□□□□ -1.89
UFD1P53044 OSH3YHR073W 2991 nt3.24□□□□□ -1.89
UFD1P53044 YLR345WYLR345W 1530 nt3.24□□□□□ -1.89
UFD1P53044 AIP1YMR092C 1848 nt3.23□□□□□ -1.89
UFD1P53044 BAR1YIL015W 1764 nt3.23□□□□□ -1.89
UFD1P53044 NOG1YPL093W 1944 nt3.23□□□□□ -1.89
UFD1P53044 MAF1YDR005C 1188 nt3.23□□□□□ -1.89
UFD1P53044 CPR1YDR155C 489 nt3.23□□□□□ -1.89
UFD1P53044 NSE3YDR288W 912 nt3.23□□□□□ -1.89
UFD1P53044 FUR1YHR128W 651 nt3.23□□□□□ -1.89
UFD1P53044 DCS1YLR270W 1053 nt3.23□□□□□ -1.89
UFD1P53044 ALO1YML086C 1581 nt3.23□□□□□ -1.89
UFD1P53044 PFA4YOL003C 1137 nt3.23□□□□□ -1.89
UFD1P53044 LDS2YOL047C 1071 nt3.23□□□□□ -1.89
UFD1P53044 ARO9YHR137W 1542 nt3.23□□□□□ -1.89
UFD1P53044 SSU1YPL092W 1377 nt3.23□□□□□ -1.89
UFD1P53044 MEK1YOR351C 1494 nt3.22□□□□□ -1.89
UFD1P53044 ALA1YOR335C 2877 nt3.22□□□□□ -1.89
UFD1P53044 YRB30YGL164C 1323 nt3.22□□□□□ -1.89
UFD1P53044 HMS1YOR032C 1305 nt3.22□□□□□ -1.89
UFD1P53044 YCL068CYCL068C 783 nt3.22□□□□□ -1.89
UFD1P53044 RMD5YDR255C 1266 nt3.22□□□□□ -1.89
UFD1P53044 YGR219WYGR219W 342 nt3.22□□□□□ -1.89
UFD1P53044 ANB1YJR047C 474 nt3.22□□□□□ -1.89
UFD1P53044 AUR1YKL004W 1206 nt3.22□□□□□ -1.89
UFD1P53044 YGK3YOL128C 1128 nt3.22□□□□□ -1.89
UFD1P53044 MED7YOL135C 669 nt3.22□□□□□ -1.89
UFD1P53044 SQS1YNL224C 2304 nt3.22□□□□□ -1.89
UFD1P53044 SSL1YLR005W 1386 nt3.22□□□□□ -1.89
UFD1P53044 GLO3YER122C 1482 nt3.22□□□□□ -1.89
UFD1P53044 UTP6YDR449C 1323 nt3.21□□□□□ -1.89
UFD1P53044 QRI7YDL104C 1224 nt3.21□□□□□ -1.9
UFD1P53044 CWC2YDL209C 1020 nt3.21□□□□□ -1.9
UFD1P53044 YDR133CYDR133C 336 nt3.21□□□□□ -1.9
UFD1P53044 YER039C-AYER039C-A 219 nt3.21□□□□□ -1.9
UFD1P53044 BMH1YER177W 804 nt3.21□□□□□ -1.9
UFD1P53044 ECO1YFR027W 846 nt3.21□□□□□ -1.9
UFD1P53044 CNN1YFR046C 1086 nt3.21□□□□□ -1.9
UFD1P53044 IGO2YHR132W-A 396 nt3.21□□□□□ -1.9
UFD1P53044 YJR037WYJR037W 384 nt3.21□□□□□ -1.9
UFD1P53044 YMR084WYMR084W 789 nt3.21□□□□□ -1.9
UFD1P53044 YNL234WYNL234W 1281 nt3.21□□□□□ -1.9
UFD1P53044 FDH1YOR388C 1131 nt3.21□□□□□ -1.9
UFD1P53044 YSA1YBR111C 696 nt3.21□□□□□ -1.9
UFD1P53044 MTR4YJL050W 3222 nt3.21□□□□□ -1.9
Retrieved 100 of 7,029 protein–RNA pairs in 25.7 ms