Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC21.14■□□□□ 0.97
PDX1P52945 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC21.14■□□□□ 0.97
PDX1P52945 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC21.14■□□□□ 0.97
PDX1P52945 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
PDX1P52945 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
PDX1P52945 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
PDX1P52945 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PDX1P52945 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
PDX1P52945 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
PDX1P52945 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PDX1P52945 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
PDX1P52945 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
PDX1P52945 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PDX1P52945 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PDX1P52945 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PDX1P52945 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PDX1P52945 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PDX1P52945 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC21.13■□□□□ 0.97
PDX1P52945 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.13■□□□□ 0.97
PDX1P52945 AC080038.1-201ENST00000611274 1154 ntBASIC21.13■□□□□ 0.97
PDX1P52945 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PDX1P52945 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PDX1P52945 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PDX1P52945 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.13■□□□□ 0.97
PDX1P52945 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
PDX1P52945 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PDX1P52945 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PDX1P52945 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
PDX1P52945 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC21.12■□□□□ 0.97
PDX1P52945 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC21.12■□□□□ 0.97
PDX1P52945 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC21.12■□□□□ 0.97
PDX1P52945 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC21.12■□□□□ 0.97
PDX1P52945 GALNS-213ENST00000569433 723 ntTSL 3 BASIC21.12■□□□□ 0.97
PDX1P52945 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC21.12■□□□□ 0.97
PDX1P52945 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC21.12■□□□□ 0.97
PDX1P52945 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PDX1P52945 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PDX1P52945 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PDX1P52945 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
PDX1P52945 AC004687.1-201ENST00000579003 1625 ntBASIC21.11■□□□□ 0.97
PDX1P52945 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
PDX1P52945 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
PDX1P52945 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PDX1P52945 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
PDX1P52945 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC21.11■□□□□ 0.97
PDX1P52945 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC21.11■□□□□ 0.97
PDX1P52945 AC079630.1-202ENST00000618127 1840 ntBASIC21.11■□□□□ 0.97
PDX1P52945 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PDX1P52945 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
PDX1P52945 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PDX1P52945 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PDX1P52945 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PDX1P52945 STX7-201ENST00000367937 1090 ntTSL 5 BASIC21.11■□□□□ 0.97
PDX1P52945 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC21.11■□□□□ 0.97
PDX1P52945 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
PDX1P52945 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC21.11■□□□□ 0.97
PDX1P52945 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC21.11■□□□□ 0.97
PDX1P52945 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC21.11■□□□□ 0.97
PDX1P52945 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.11■□□□□ 0.97
PDX1P52945 AP004607.4-201ENST00000530158 1459 ntBASIC21.11■□□□□ 0.97
PDX1P52945 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PDX1P52945 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PDX1P52945 AC004854.2-201ENST00000608450 1441 ntBASIC21.11■□□□□ 0.97
PDX1P52945 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PDX1P52945 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.11■□□□□ 0.97
PDX1P52945 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
PDX1P52945 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.1■□□□□ 0.97
PDX1P52945 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
PDX1P52945 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC21.1■□□□□ 0.97
PDX1P52945 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
PDX1P52945 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
PDX1P52945 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.1■□□□□ 0.97
PDX1P52945 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC21.1■□□□□ 0.97
PDX1P52945 CDCA4P2-201ENST00000441182 718 ntBASIC21.1■□□□□ 0.97
PDX1P52945 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC21.1■□□□□ 0.97
PDX1P52945 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC21.1■□□□□ 0.97
PDX1P52945 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC21.1■□□□□ 0.97
PDX1P52945 AC137761.2-201ENST00000561729 223 ntBASIC21.1■□□□□ 0.97
PDX1P52945 AC145350.3-201ENST00000569033 163 ntBASIC21.1■□□□□ 0.97
PDX1P52945 AC073111.5-205ENST00000641717 521 ntBASIC21.1■□□□□ 0.97
PDX1P52945 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
PDX1P52945 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC21.09■□□□□ 0.97
PDX1P52945 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PDX1P52945 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC21.09■□□□□ 0.97
PDX1P52945 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
PDX1P52945 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PDX1P52945 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PDX1P52945 HSCB-202ENST00000398941 955 ntTSL 2 BASIC21.09■□□□□ 0.97
PDX1P52945 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PDX1P52945 DBI-210ENST00000542275 757 ntTSL 5 BASIC21.09■□□□□ 0.97
PDX1P52945 TK2-208ENST00000545043 1120 ntTSL 2 BASIC21.09■□□□□ 0.97
PDX1P52945 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
PDX1P52945 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PDX1P52945 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
PDX1P52945 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PDX1P52945 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PDX1P52945 EI24-211ENST00000534546 1544 ntTSL 2 BASIC21.09■□□□□ 0.97
PDX1P52945 ANOS2P-203ENST00000472227 1816 ntBASIC21.08■□□□□ 0.97
PDX1P52945 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.08■□□□□ 0.97
PDX1P52945 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms