Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
CX3CR1P49238 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC19.08■□□□□ 0.64
CX3CR1P49238 AC099791.2-201ENST00000605725 427 ntBASIC19.08■□□□□ 0.64
CX3CR1P49238 pRNA.6-201ENST00000610482 90 ntBASIC19.08■□□□□ 0.64
CX3CR1P49238 pRNA.5-201ENST00000612139 90 ntBASIC19.08■□□□□ 0.64
CX3CR1P49238 pRNA.11-201ENST00000618423 90 ntBASIC19.08■□□□□ 0.64
CX3CR1P49238 pRNA.13-201ENST00000619112 90 ntBASIC19.08■□□□□ 0.64
CX3CR1P49238 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.08■□□□□ 0.64
CX3CR1P49238 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CX3CR1P49238 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
CX3CR1P49238 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.08■□□□□ 0.64
CX3CR1P49238 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.08■□□□□ 0.64
CX3CR1P49238 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CX3CR1P49238 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.08■□□□□ 0.64
CX3CR1P49238 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.08■□□□□ 0.64
CX3CR1P49238 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
CX3CR1P49238 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.07■□□□□ 0.64
CX3CR1P49238 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CX3CR1P49238 GATM-206ENST00000558336 1522 ntTSL 2 BASIC19.07■□□□□ 0.64
CX3CR1P49238 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CX3CR1P49238 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC19.07■□□□□ 0.64
CX3CR1P49238 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.07■□□□□ 0.64
CX3CR1P49238 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC19.07■□□□□ 0.64
CX3CR1P49238 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CX3CR1P49238 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CX3CR1P49238 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.07■□□□□ 0.64
CX3CR1P49238 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CX3CR1P49238 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.07■□□□□ 0.64
CX3CR1P49238 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CX3CR1P49238 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CX3CR1P49238 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.07■□□□□ 0.64
CX3CR1P49238 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.06■□□□□ 0.64
CX3CR1P49238 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CX3CR1P49238 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.06■□□□□ 0.64
CX3CR1P49238 AC133637.1-201ENST00000624115 1537 ntBASIC19.06■□□□□ 0.64
CX3CR1P49238 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
CX3CR1P49238 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.06■□□□□ 0.64
CX3CR1P49238 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CX3CR1P49238 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CX3CR1P49238 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC19.06■□□□□ 0.64
CX3CR1P49238 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
CX3CR1P49238 RASSF1-AS1-201ENST00000629828 790 ntBASIC19.06■□□□□ 0.64
CX3CR1P49238 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CX3CR1P49238 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
CX3CR1P49238 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CX3CR1P49238 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CX3CR1P49238 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
CX3CR1P49238 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CX3CR1P49238 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
CX3CR1P49238 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.06■□□□□ 0.64
CX3CR1P49238 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.05■□□□□ 0.64
CX3CR1P49238 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.05■□□□□ 0.64
CX3CR1P49238 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.05■□□□□ 0.64
CX3CR1P49238 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CX3CR1P49238 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CX3CR1P49238 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CX3CR1P49238 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.05■□□□□ 0.64
CX3CR1P49238 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CX3CR1P49238 SRD5A1P1-201ENST00000442297 786 ntBASIC19.05■□□□□ 0.64
CX3CR1P49238 AL356441.2-201ENST00000443009 864 ntBASIC19.05■□□□□ 0.64
CX3CR1P49238 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC19.05■□□□□ 0.64
CX3CR1P49238 CA15P2-201ENST00000611168 834 ntBASIC19.05■□□□□ 0.64
CX3CR1P49238 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.05■□□□□ 0.64
CX3CR1P49238 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CX3CR1P49238 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CX3CR1P49238 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CX3CR1P49238 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CX3CR1P49238 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CX3CR1P49238 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CX3CR1P49238 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.04■□□□□ 0.64
CX3CR1P49238 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CX3CR1P49238 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
CX3CR1P49238 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CX3CR1P49238 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CX3CR1P49238 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CX3CR1P49238 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
CX3CR1P49238 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CX3CR1P49238 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CX3CR1P49238 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.04■□□□□ 0.64
CX3CR1P49238 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.04■□□□□ 0.64
CX3CR1P49238 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.04■□□□□ 0.64
CX3CR1P49238 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CX3CR1P49238 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.04■□□□□ 0.64
CX3CR1P49238 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CX3CR1P49238 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
CX3CR1P49238 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CX3CR1P49238 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CX3CR1P49238 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CX3CR1P49238 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CX3CR1P49238 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
CX3CR1P49238 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CX3CR1P49238 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
CX3CR1P49238 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC19.03■□□□□ 0.64
CX3CR1P49238 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CX3CR1P49238 AL024507.2-201ENST00000606070 2574 ntBASIC19.03■□□□□ 0.64
CX3CR1P49238 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19.03■□□□□ 0.64
CX3CR1P49238 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CX3CR1P49238 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.02■□□□□ 0.64
CX3CR1P49238 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CX3CR1P49238 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms