Protein–RNA interactions for Protein: P45973

CBX5, Chromobox protein homolog 5, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5P45973 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
CBX5P45973 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CBX5P45973 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CBX5P45973 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CBX5P45973 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
CBX5P45973 AL137060.1-201ENST00000618151 2648 ntBASIC18.64■□□□□ 0.57
CBX5P45973 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
CBX5P45973 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CBX5P45973 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CBX5P45973 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
CBX5P45973 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CBX5P45973 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CBX5P45973 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CBX5P45973 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CBX5P45973 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CBX5P45973 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CBX5P45973 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC18.63■□□□□ 0.57
CBX5P45973 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CBX5P45973 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CBX5P45973 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CBX5P45973 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CBX5P45973 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CBX5P45973 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CBX5P45973 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.63■□□□□ 0.57
CBX5P45973 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CBX5P45973 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CBX5P45973 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CBX5P45973 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CBX5P45973 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CBX5P45973 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CBX5P45973 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CBX5P45973 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CBX5P45973 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
CBX5P45973 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CBX5P45973 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC18.62■□□□□ 0.57
CBX5P45973 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC18.62■□□□□ 0.57
CBX5P45973 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CBX5P45973 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
CBX5P45973 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC18.62■□□□□ 0.57
CBX5P45973 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CBX5P45973 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CBX5P45973 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CBX5P45973 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.62■□□□□ 0.57
CBX5P45973 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.62■□□□□ 0.57
CBX5P45973 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.62■□□□□ 0.57
CBX5P45973 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CBX5P45973 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CBX5P45973 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CBX5P45973 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CBX5P45973 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
CBX5P45973 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
CBX5P45973 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CBX5P45973 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CBX5P45973 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CBX5P45973 KRT18P24-201ENST00000344739 1156 ntBASIC18.61■□□□□ 0.57
CBX5P45973 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
CBX5P45973 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CBX5P45973 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC18.61■□□□□ 0.57
CBX5P45973 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CBX5P45973 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CBX5P45973 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CBX5P45973 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CBX5P45973 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CBX5P45973 MIR4281-201ENST00000580852 62 ntBASIC18.6■□□□□ 0.57
CBX5P45973 THA1P-201ENST00000590384 1145 ntBASIC18.6■□□□□ 0.57
CBX5P45973 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.6■□□□□ 0.57
CBX5P45973 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CBX5P45973 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CBX5P45973 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CBX5P45973 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC18.6■□□□□ 0.57
CBX5P45973 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC18.59■□□□□ 0.57
CBX5P45973 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CBX5P45973 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CBX5P45973 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CBX5P45973 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC18.59■□□□□ 0.57
CBX5P45973 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
CBX5P45973 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CBX5P45973 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CBX5P45973 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
CBX5P45973 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
CBX5P45973 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CBX5P45973 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
CBX5P45973 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
CBX5P45973 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CBX5P45973 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
CBX5P45973 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CBX5P45973 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CBX5P45973 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
CBX5P45973 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC18.58■□□□□ 0.56
CBX5P45973 MBP-237ENST00000579129 1052 ntTSL 5 BASIC18.58■□□□□ 0.56
CBX5P45973 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CBX5P45973 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CBX5P45973 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC18.58■□□□□ 0.56
CBX5P45973 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CBX5P45973 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CBX5P45973 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC18.57■□□□□ 0.56
CBX5P45973 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CBX5P45973 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CBX5P45973 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CBX5P45973 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms