Protein–RNA interactions for Protein: P38936

CDKN1A, Cyclin-dependent kinase inhibitor 1, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1AP38936 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDKN1AP38936 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDKN1AP38936 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
CDKN1AP38936 AC004854.2-201ENST00000608450 1441 ntBASIC18.58■□□□□ 0.57
CDKN1AP38936 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC18.58■□□□□ 0.57
CDKN1AP38936 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CDKN1AP38936 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC18.58■□□□□ 0.57
CDKN1AP38936 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.57
CDKN1AP38936 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CDKN1AP38936 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
CDKN1AP38936 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
CDKN1AP38936 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC18.58■□□□□ 0.56
CDKN1AP38936 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CDKN1AP38936 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CDKN1AP38936 DBI-210ENST00000542275 757 ntTSL 5 BASIC18.58■□□□□ 0.56
CDKN1AP38936 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC18.58■□□□□ 0.56
CDKN1AP38936 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CDKN1AP38936 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CDKN1AP38936 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC18.58■□□□□ 0.56
CDKN1AP38936 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDKN1AP38936 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
CDKN1AP38936 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDKN1AP38936 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDKN1AP38936 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDKN1AP38936 STX7-201ENST00000367937 1090 ntTSL 5 BASIC18.57■□□□□ 0.56
CDKN1AP38936 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC18.57■□□□□ 0.56
CDKN1AP38936 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC18.57■□□□□ 0.56
CDKN1AP38936 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.57■□□□□ 0.56
CDKN1AP38936 SMUG1P1-201ENST00000590640 811 ntBASIC18.57■□□□□ 0.56
CDKN1AP38936 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CDKN1AP38936 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CDKN1AP38936 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC18.57■□□□□ 0.56
CDKN1AP38936 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC18.57■□□□□ 0.56
CDKN1AP38936 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDKN1AP38936 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDKN1AP38936 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CDKN1AP38936 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
CDKN1AP38936 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDKN1AP38936 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC18.57■□□□□ 0.56
CDKN1AP38936 CLDN5-201ENST00000403084 2357 ntBASIC18.56■□□□□ 0.56
CDKN1AP38936 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDKN1AP38936 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDKN1AP38936 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC18.56■□□□□ 0.56
CDKN1AP38936 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC18.56■□□□□ 0.56
CDKN1AP38936 HLA-L-209ENST00000420110 1011 ntBASIC18.56■□□□□ 0.56
CDKN1AP38936 AC006015.1-201ENST00000429970 570 ntBASIC18.56■□□□□ 0.56
CDKN1AP38936 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC18.56■□□□□ 0.56
CDKN1AP38936 AP004607.4-201ENST00000530158 1459 ntBASIC18.56■□□□□ 0.56
CDKN1AP38936 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CDKN1AP38936 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC18.56■□□□□ 0.56
CDKN1AP38936 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CDKN1AP38936 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDKN1AP38936 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CDKN1AP38936 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CDKN1AP38936 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC18.55■□□□□ 0.56
CDKN1AP38936 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
CDKN1AP38936 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC18.55■□□□□ 0.56
CDKN1AP38936 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC18.55■□□□□ 0.56
CDKN1AP38936 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC18.55■□□□□ 0.56
CDKN1AP38936 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CDKN1AP38936 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDKN1AP38936 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CDKN1AP38936 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDKN1AP38936 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDKN1AP38936 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC18.54■□□□□ 0.56
CDKN1AP38936 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDKN1AP38936 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CDKN1AP38936 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CDKN1AP38936 AC012676.1-201ENST00000574705 1949 ntBASIC18.54■□□□□ 0.56
CDKN1AP38936 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDKN1AP38936 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDKN1AP38936 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC18.54■□□□□ 0.56
CDKN1AP38936 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDKN1AP38936 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CDKN1AP38936 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC18.53■□□□□ 0.56
CDKN1AP38936 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
CDKN1AP38936 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC18.53■□□□□ 0.56
CDKN1AP38936 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDKN1AP38936 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDKN1AP38936 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDKN1AP38936 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDKN1AP38936 HSCB-202ENST00000398941 955 ntTSL 2 BASIC18.53■□□□□ 0.56
CDKN1AP38936 TK2-208ENST00000545043 1120 ntTSL 2 BASIC18.53■□□□□ 0.56
CDKN1AP38936 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDKN1AP38936 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDKN1AP38936 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDKN1AP38936 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDKN1AP38936 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CDKN1AP38936 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CDKN1AP38936 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
CDKN1AP38936 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
CDKN1AP38936 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDKN1AP38936 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC18.52■□□□□ 0.56
CDKN1AP38936 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC18.52■□□□□ 0.56
CDKN1AP38936 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC18.52■□□□□ 0.56
CDKN1AP38936 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC18.52■□□□□ 0.56
CDKN1AP38936 AC073111.5-205ENST00000641717 521 ntBASIC18.52■□□□□ 0.56
CDKN1AP38936 OXCT2P1-201ENST00000447263 1535 ntBASIC18.52■□□□□ 0.56
CDKN1AP38936 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CDKN1AP38936 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms