Protein–RNA interactions for Protein: P33202

UFD4, Ubiquitin fusion degradation protein 4, yeastyeast

Predictions only

Length 1,483 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UFD4P33202 RPO21YDL140C 5202 nt4.5□□□□□ -1.69
UFD4P33202 tW(CCA)G1tW(CCA)G1 72 nt4.49□□□□□ -1.69
UFD4P33202 tW(CCA)G2tW(CCA)G2 72 nt4.49□□□□□ -1.69
UFD4P33202 tW(CCA)JtW(CCA)J 72 nt4.49□□□□□ -1.69
UFD4P33202 tW(CCA)KtW(CCA)K 72 nt4.49□□□□□ -1.69
UFD4P33202 tW(CCA)MtW(CCA)M 72 nt4.49□□□□□ -1.69
UFD4P33202 tW(CCA)PtW(CCA)P 72 nt4.49□□□□□ -1.69
UFD4P33202 SME1YOR159C 285 nt4.49□□□□□ -1.69
UFD4P33202 UBP1YDL122W 2430 nt4.49□□□□□ -1.69
UFD4P33202 ARO10YDR380W 1908 nt4.49□□□□□ -1.69
UFD4P33202 CAJ1YER048C 1176 nt4.49□□□□□ -1.69
UFD4P33202 CWH41YGL027C 2502 nt4.48□□□□□ -1.69
UFD4P33202 STE11YLR362W 2154 nt4.48□□□□□ -1.69
UFD4P33202 SNF3YDL194W 2655 nt4.48□□□□□ -1.69
UFD4P33202 YRM1YOR172W 2361 nt4.48□□□□□ -1.69
UFD4P33202 YDR464C-AYDR464C-A 189 nt4.48□□□□□ -1.69
UFD4P33202 YPL150WYPL150W 2706 nt4.47□□□□□ -1.69
UFD4P33202 PRX1YBL064C 786 nt4.47□□□□□ -1.69
UFD4P33202 YBR298C-AYBR298C-A 222 nt4.47□□□□□ -1.69
UFD4P33202 YHR080CYHR080C 4038 nt4.47□□□□□ -1.69
UFD4P33202 OSW7YFR039C 1533 nt4.47□□□□□ -1.69
UFD4P33202 SAC1YKL212W 1872 nt4.46□□□□□ -1.7
UFD4P33202 PEX18YHR160C 852 nt4.46□□□□□ -1.7
UFD4P33202 RPL23AYBL087C 414 nt4.46□□□□□ -1.7
UFD4P33202 INO80YGL150C 4470 nt4.46□□□□□ -1.7
UFD4P33202 KRE5YOR336W 4098 nt4.45□□□□□ -1.7
UFD4P33202 STP4YDL048C 1473 nt4.45□□□□□ -1.7
UFD4P33202 ERG28YER044C 447 nt4.45□□□□□ -1.7
UFD4P33202 CMD1YBR109C 444 nt4.45□□□□□ -1.7
UFD4P33202 ESL2YKR096W 3588 nt4.45□□□□□ -1.7
UFD4P33202 NEW1YPL226W 3591 nt4.45□□□□□ -1.7
UFD4P33202 YFL065CYFL065C 309 nt4.44□□□□□ -1.7
UFD4P33202 ICY1YMR195W 384 nt4.44□□□□□ -1.7
UFD4P33202 VPS17YOR132W 1656 nt4.44□□□□□ -1.7
UFD4P33202 SIN3YOL004W 4611 nt4.44□□□□□ -1.7
UFD4P33202 NGL3YML118W 1518 nt4.44□□□□□ -1.7
UFD4P33202 PDR5YOR153W 4536 nt4.44□□□□□ -1.7
UFD4P33202 HOS3YPL116W 2094 nt4.44□□□□□ -1.7
UFD4P33202 YHR078WYHR078W 1659 nt4.43□□□□□ -1.7
UFD4P33202 MPS2YGL075C 1164 nt4.43□□□□□ -1.7
UFD4P33202 CAP2YIL034C 864 nt4.43□□□□□ -1.7
UFD4P33202 RPA190YOR341W 4995 nt4.42□□□□□ -1.7
UFD4P33202 PMS1YNL082W 2622 nt4.42□□□□□ -1.7
UFD4P33202 RSM10YDR041W 612 nt4.42□□□□□ -1.7
UFD4P33202 YFL051CYFL051C 483 nt4.42□□□□□ -1.7
UFD4P33202 AYT1YLL063C 1425 nt4.42□□□□□ -1.7
UFD4P33202 AUS1YOR011W 4185 nt4.41□□□□□ -1.7
UFD4P33202 FMP33YJL161W 543 nt4.41□□□□□ -1.7
UFD4P33202 ENA5YDR038C 3276 nt4.41□□□□□ -1.7
UFD4P33202 YFR006WYFR006W 1608 nt4.4□□□□□ -1.7
UFD4P33202 HEF3YNL014W 3135 nt4.4□□□□□ -1.7
UFD4P33202 RNT1YMR239C 1416 nt4.4□□□□□ -1.7
UFD4P33202 MPC54YOR177C 1395 nt4.4□□□□□ -1.7
UFD4P33202 YDR222WYDR222W 1248 nt4.4□□□□□ -1.71
UFD4P33202 ASG7YJL170C 630 nt4.4□□□□□ -1.71
UFD4P33202 LAC1YKL008C 1257 nt4.4□□□□□ -1.71
UFD4P33202 PRR2YDL214C 2100 nt4.4□□□□□ -1.71
UFD4P33202 UBC1YDR177W 648 nt4.39□□□□□ -1.71
UFD4P33202 ATG27YJL178C 816 nt4.39□□□□□ -1.71
UFD4P33202 JJJ1YNL227C 1773 nt4.39□□□□□ -1.71
UFD4P33202 MDM38YOL027C 1722 nt4.39□□□□□ -1.71
UFD4P33202 IZH3YLR023C 1632 nt4.39□□□□□ -1.71
UFD4P33202 YHR214C-EYHR214C-E 300 nt4.38□□□□□ -1.71
UFD4P33202 YAR070CYAR070C 300 nt4.38□□□□□ -1.71
UFD4P33202 OM14YBR230C 405 nt4.38□□□□□ -1.71
UFD4P33202 APM4YOL062C 1476 nt4.38□□□□□ -1.71
UFD4P33202 NSP1YJL041W 2472 nt4.38□□□□□ -1.71
UFD4P33202 YSH1YLR277C 2340 nt4.38□□□□□ -1.71
UFD4P33202 FZF1YGL254W 900 nt4.37□□□□□ -1.71
UFD4P33202 MGM101YJR144W 810 nt4.37□□□□□ -1.71
UFD4P33202 MSS1YMR023C 1581 nt4.37□□□□□ -1.71
UFD4P33202 COM2YER130C 1332 nt4.37□□□□□ -1.71
UFD4P33202 YHR032W-AYHR032W-A 180 nt4.37□□□□□ -1.71
UFD4P33202 WSS1YHR134W 810 nt4.37□□□□□ -1.71
UFD4P33202 RPL6AYML073C 531 nt4.37□□□□□ -1.71
UFD4P33202 YGK3YOL128C 1128 nt4.37□□□□□ -1.71
UFD4P33202 RRP36YOR287C 903 nt4.37□□□□□ -1.71
UFD4P33202 SPA2YLL021W 4401 nt4.36□□□□□ -1.71
UFD4P33202 COX17YLL009C 210 nt4.36□□□□□ -1.71
UFD4P33202 TOS8YGL096W 831 nt4.35□□□□□ -1.71
UFD4P33202 DAL2YIR029W 1032 nt4.35□□□□□ -1.71
UFD4P33202 ITC1YGL133W 3795 nt4.34□□□□□ -1.71
UFD4P33202 AST2YER101C 1293 nt4.34□□□□□ -1.71
UFD4P33202 EMC6YLL014W 327 nt4.34□□□□□ -1.71
UFD4P33202 TSC11YER093C 4293 nt4.33□□□□□ -1.72
UFD4P33202 YFR032C-BYFR032C-B 264 nt4.33□□□□□ -1.72
UFD4P33202 ROK1YGL171W 1695 nt4.33□□□□□ -1.72
UFD4P33202 SAP155YFR040W 3009 nt4.32□□□□□ -1.72
UFD4P33202 TUL1YKL034W 2277 nt4.32□□□□□ -1.72
UFD4P33202 PTP3YER075C 2787 nt4.32□□□□□ -1.72
UFD4P33202 YLR177WYLR177W 1887 nt4.31□□□□□ -1.72
UFD4P33202 CNL1YDR357C 369 nt4.31□□□□□ -1.72
UFD4P33202 YGL082WYGL082W 1146 nt4.31□□□□□ -1.72
UFD4P33202 TOM20YGR082W 552 nt4.31□□□□□ -1.72
UFD4P33202 RRP46YGR095C 672 nt4.31□□□□□ -1.72
UFD4P33202 JIP3YLR331C 378 nt4.31□□□□□ -1.72
UFD4P33202 KTI11YBL071W-A 249 nt4.31□□□□□ -1.72
UFD4P33202 DGK1YOR311C 873 nt4.31□□□□□ -1.72
UFD4P33202 RTA1YGR213C 954 nt4.3□□□□□ -1.72
UFD4P33202 YPT35YHR105W 645 nt4.3□□□□□ -1.72
Retrieved 100 of 7,029 protein–RNA pairs in 13.8 ms