Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
CPS1P31327 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
CPS1P31327 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC31.21■■■□□ 2.59
CPS1P31327 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
CPS1P31327 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
CPS1P31327 LINC01529-204ENST00000636474 1715 ntBASIC31.21■■■□□ 2.59
CPS1P31327 KRT87P-202ENST00000534226 1464 ntBASIC31.21■■■□□ 2.59
CPS1P31327 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
CPS1P31327 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
CPS1P31327 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC31.2■■■□□ 2.59
CPS1P31327 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
CPS1P31327 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC31.2■■■□□ 2.59
CPS1P31327 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC31.2■■■□□ 2.59
CPS1P31327 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC31.2■■■□□ 2.59
CPS1P31327 BRI3-207ENST00000539286 699 ntTSL 2 BASIC31.2■■■□□ 2.59
CPS1P31327 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC31.2■■■□□ 2.59
CPS1P31327 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC31.2■■■□□ 2.58
CPS1P31327 AC135731.1-201ENST00000569415 2548 ntBASIC31.19■■■□□ 2.58
CPS1P31327 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC31.19■■■□□ 2.58
CPS1P31327 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC31.19■■■□□ 2.58
CPS1P31327 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC31.19■■■□□ 2.58
CPS1P31327 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC31.19■■■□□ 2.58
CPS1P31327 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC31.19■■■□□ 2.58
CPS1P31327 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC31.19■■■□□ 2.58
CPS1P31327 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
CPS1P31327 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC31.19■■■□□ 2.58
CPS1P31327 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
CPS1P31327 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC31.19■■■□□ 2.58
CPS1P31327 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC31.18■■■□□ 2.58
CPS1P31327 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
CPS1P31327 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC31.18■■■□□ 2.58
CPS1P31327 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC31.18■■■□□ 2.58
CPS1P31327 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC31.18■■■□□ 2.58
CPS1P31327 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC31.18■■■□□ 2.58
CPS1P31327 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC31.18■■■□□ 2.58
CPS1P31327 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
CPS1P31327 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
CPS1P31327 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
CPS1P31327 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC31.17■■■□□ 2.58
CPS1P31327 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC31.17■■■□□ 2.58
CPS1P31327 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
CPS1P31327 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
CPS1P31327 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
CPS1P31327 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC31.17■■■□□ 2.58
CPS1P31327 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
CPS1P31327 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC31.17■■■□□ 2.58
CPS1P31327 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
CPS1P31327 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
CPS1P31327 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
CPS1P31327 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
CPS1P31327 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
CPS1P31327 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
CPS1P31327 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC31.16■■■□□ 2.58
CPS1P31327 PPP1R14BP2-201ENST00000426284 444 ntBASIC31.16■■■□□ 2.58
CPS1P31327 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC31.16■■■□□ 2.58
CPS1P31327 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC31.16■■■□□ 2.58
CPS1P31327 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC31.16■■■□□ 2.58
CPS1P31327 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC31.16■■■□□ 2.58
CPS1P31327 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
CPS1P31327 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
CPS1P31327 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC31.15■■■□□ 2.58
CPS1P31327 MARS-234ENST00000630571 216 ntTSL 5 BASIC31.15■■■□□ 2.58
CPS1P31327 MARS-235ENST00000630803 183 ntTSL 3 BASIC31.15■■■□□ 2.58
CPS1P31327 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC31.15■■■□□ 2.58
CPS1P31327 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC31.15■■■□□ 2.58
CPS1P31327 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC31.14■■■□□ 2.58
CPS1P31327 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC31.14■■■□□ 2.58
CPS1P31327 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC31.14■■■□□ 2.58
CPS1P31327 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
CPS1P31327 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
CPS1P31327 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
CPS1P31327 MIR1224-201ENST00000408193 85 ntBASIC31.14■■■□□ 2.57
CPS1P31327 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC31.14■■■□□ 2.57
CPS1P31327 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC31.14■■■□□ 2.57
CPS1P31327 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC31.14■■■□□ 2.57
CPS1P31327 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC31.13■■■□□ 2.57
CPS1P31327 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC31.13■■■□□ 2.57
CPS1P31327 AC138932.3-201ENST00000567634 1902 ntBASIC31.13■■■□□ 2.57
CPS1P31327 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
CPS1P31327 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC31.13■■■□□ 2.57
CPS1P31327 AL158047.1-201ENST00000445918 881 ntBASIC31.13■■■□□ 2.57
CPS1P31327 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC31.13■■■□□ 2.57
CPS1P31327 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC31.13■■■□□ 2.57
CPS1P31327 AC142381.3-201ENST00000568208 1670 ntBASIC31.12■■■□□ 2.57
CPS1P31327 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
CPS1P31327 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC31.12■■■□□ 2.57
CPS1P31327 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC31.12■■■□□ 2.57
CPS1P31327 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC31.12■■■□□ 2.57
CPS1P31327 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC31.12■■■□□ 2.57
CPS1P31327 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC31.12■■■□□ 2.57
CPS1P31327 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC31.11■■■□□ 2.57
CPS1P31327 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC31.11■■■□□ 2.57
CPS1P31327 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC31.11■■■□□ 2.57
CPS1P31327 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC31.11■■■□□ 2.57
CPS1P31327 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC31.11■■■□□ 2.57
CPS1P31327 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
CPS1P31327 AC142381.4-202ENST00000563973 229 ntBASIC31.11■■■□□ 2.57
CPS1P31327 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
CPS1P31327 EED-207ENST00000528180 1745 ntTSL 5 BASIC31.11■■■□□ 2.57
CPS1P31327 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC31.11■■■□□ 2.57
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms