Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 AC244015.2-201ENST00000616358 1861 ntBASIC21.15■□□□□ 0.98
EPHA3P29320 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
EPHA3P29320 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
EPHA3P29320 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
EPHA3P29320 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.15■□□□□ 0.98
EPHA3P29320 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
EPHA3P29320 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.15■□□□□ 0.98
EPHA3P29320 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21.15■□□□□ 0.98
EPHA3P29320 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
EPHA3P29320 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
EPHA3P29320 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
EPHA3P29320 YBX1P4-201ENST00000392794 808 ntBASIC21.14■□□□□ 0.97
EPHA3P29320 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC21.14■□□□□ 0.97
EPHA3P29320 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
EPHA3P29320 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
EPHA3P29320 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC21.14■□□□□ 0.97
EPHA3P29320 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC21.14■□□□□ 0.97
EPHA3P29320 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
EPHA3P29320 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
EPHA3P29320 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.14■□□□□ 0.97
EPHA3P29320 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
EPHA3P29320 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC21.13■□□□□ 0.97
EPHA3P29320 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.13■□□□□ 0.97
EPHA3P29320 CLTA-206ENST00000466396 695 ntTSL 2 BASIC21.13■□□□□ 0.97
EPHA3P29320 CA15P2-201ENST00000611168 834 ntBASIC21.13■□□□□ 0.97
EPHA3P29320 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
EPHA3P29320 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.13■□□□□ 0.97
EPHA3P29320 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
EPHA3P29320 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
EPHA3P29320 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
EPHA3P29320 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
EPHA3P29320 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC21.13■□□□□ 0.97
EPHA3P29320 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
EPHA3P29320 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
EPHA3P29320 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
EPHA3P29320 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
EPHA3P29320 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.12■□□□□ 0.97
EPHA3P29320 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
EPHA3P29320 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
EPHA3P29320 AL033527.3-201ENST00000566366 1196 ntBASIC21.12■□□□□ 0.97
EPHA3P29320 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
EPHA3P29320 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
EPHA3P29320 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
EPHA3P29320 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
EPHA3P29320 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
EPHA3P29320 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
EPHA3P29320 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
EPHA3P29320 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
EPHA3P29320 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
EPHA3P29320 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
EPHA3P29320 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC21.11■□□□□ 0.97
EPHA3P29320 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
EPHA3P29320 NKILA-201ENST00000613231 537 ntTSL 4 BASIC21.11■□□□□ 0.97
EPHA3P29320 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC21.11■□□□□ 0.97
EPHA3P29320 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
EPHA3P29320 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
EPHA3P29320 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC21.11■□□□□ 0.97
EPHA3P29320 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
EPHA3P29320 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
EPHA3P29320 GOLGA2P6-201ENST00000340929 2049 ntBASIC21.11■□□□□ 0.97
EPHA3P29320 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
EPHA3P29320 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
EPHA3P29320 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.1■□□□□ 0.97
EPHA3P29320 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
EPHA3P29320 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
EPHA3P29320 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
EPHA3P29320 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.1■□□□□ 0.97
EPHA3P29320 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
EPHA3P29320 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC21.1■□□□□ 0.97
EPHA3P29320 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC21.1■□□□□ 0.97
EPHA3P29320 AC012354.3-201ENST00000623734 483 ntBASIC21.1■□□□□ 0.97
EPHA3P29320 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
EPHA3P29320 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.1■□□□□ 0.97
EPHA3P29320 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
EPHA3P29320 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
EPHA3P29320 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC21.1■□□□□ 0.97
EPHA3P29320 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
EPHA3P29320 AC021242.3-201ENST00000607598 1377 ntBASIC21.1■□□□□ 0.97
EPHA3P29320 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
EPHA3P29320 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
EPHA3P29320 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC21.09■□□□□ 0.97
EPHA3P29320 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC21.09■□□□□ 0.97
EPHA3P29320 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
EPHA3P29320 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC21.09■□□□□ 0.97
EPHA3P29320 AL031848.2-201ENST00000607670 837 ntBASIC21.09■□□□□ 0.97
EPHA3P29320 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
EPHA3P29320 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
EPHA3P29320 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
EPHA3P29320 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.09■□□□□ 0.97
EPHA3P29320 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
EPHA3P29320 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.97
EPHA3P29320 AC009102.2-201ENST00000606772 1639 ntBASIC21.08■□□□□ 0.97
EPHA3P29320 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.08■□□□□ 0.97
EPHA3P29320 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
EPHA3P29320 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
EPHA3P29320 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
EPHA3P29320 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC21.08■□□□□ 0.97
EPHA3P29320 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
EPHA3P29320 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC21.08■□□□□ 0.96
EPHA3P29320 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 151.6 ms