Protein–RNA interactions for Protein: P27449

ATP6V0C, V-type proton ATPase 16 kDa proteolipid subunit, humanhuman

Predictions only

Length 155 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0CP27449 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ATP6V0CP27449 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
ATP6V0CP27449 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ATP6V0CP27449 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC17.38■□□□□ 0.37
ATP6V0CP27449 AC011551.1-201ENST00000614101 683 ntBASIC17.38■□□□□ 0.37
ATP6V0CP27449 USF2-207ENST00000595068 1612 ntTSL 5 BASIC17.38■□□□□ 0.37
ATP6V0CP27449 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC17.38■□□□□ 0.37
ATP6V0CP27449 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ATP6V0CP27449 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC17.38■□□□□ 0.37
ATP6V0CP27449 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ATP6V0CP27449 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
ATP6V0CP27449 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ATP6V0CP27449 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC17.37■□□□□ 0.37
ATP6V0CP27449 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
ATP6V0CP27449 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC17.37■□□□□ 0.37
ATP6V0CP27449 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ATP6V0CP27449 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
ATP6V0CP27449 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
ATP6V0CP27449 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ATP6V0CP27449 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ATP6V0CP27449 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
ATP6V0CP27449 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ATP6V0CP27449 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
ATP6V0CP27449 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ATP6V0CP27449 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC17.37■□□□□ 0.37
ATP6V0CP27449 AC087393.1-201ENST00000582896 145 ntBASIC17.37■□□□□ 0.37
ATP6V0CP27449 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ATP6V0CP27449 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC17.37■□□□□ 0.37
ATP6V0CP27449 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ATP6V0CP27449 ME2-206ENST00000638410 2289 ntTSL 5 BASIC17.37■□□□□ 0.37
ATP6V0CP27449 ME2-210ENST00000639255 2262 ntTSL 5 BASIC17.37■□□□□ 0.37
ATP6V0CP27449 LINC01960-201ENST00000563759 1884 ntBASIC17.37■□□□□ 0.37
ATP6V0CP27449 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ATP6V0CP27449 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ATP6V0CP27449 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
ATP6V0CP27449 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATP6V0CP27449 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATP6V0CP27449 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
ATP6V0CP27449 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATP6V0CP27449 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATP6V0CP27449 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATP6V0CP27449 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC17.36■□□□□ 0.37
ATP6V0CP27449 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATP6V0CP27449 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATP6V0CP27449 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATP6V0CP27449 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATP6V0CP27449 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ATP6V0CP27449 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATP6V0CP27449 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ATP6V0CP27449 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC17.36■□□□□ 0.37
ATP6V0CP27449 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATP6V0CP27449 LINC01006-201ENST00000333319 2292 ntBASIC17.35■□□□□ 0.37
ATP6V0CP27449 LBH-205ENST00000407930 756 ntTSL 2 BASIC17.35■□□□□ 0.37
ATP6V0CP27449 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC17.35■□□□□ 0.37
ATP6V0CP27449 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ATP6V0CP27449 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
ATP6V0CP27449 AC009831.1-201ENST00000580420 1582 ntBASIC17.35■□□□□ 0.37
ATP6V0CP27449 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ATP6V0CP27449 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ATP6V0CP27449 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ATP6V0CP27449 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC17.35■□□□□ 0.37
ATP6V0CP27449 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ATP6V0CP27449 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ATP6V0CP27449 AC007952.6-201ENST00000573168 2673 ntBASIC17.34■□□□□ 0.37
ATP6V0CP27449 AC003957.1-201ENST00000625108 2673 ntBASIC17.34■□□□□ 0.37
ATP6V0CP27449 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ATP6V0CP27449 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ATP6V0CP27449 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC17.34■□□□□ 0.37
ATP6V0CP27449 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ATP6V0CP27449 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ATP6V0CP27449 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
ATP6V0CP27449 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC17.34■□□□□ 0.37
ATP6V0CP27449 AC018755.3-202ENST00000596210 929 ntBASIC17.34■□□□□ 0.37
ATP6V0CP27449 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
ATP6V0CP27449 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ATP6V0CP27449 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC17.33■□□□□ 0.37
ATP6V0CP27449 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
ATP6V0CP27449 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
ATP6V0CP27449 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ATP6V0CP27449 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
ATP6V0CP27449 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
ATP6V0CP27449 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
ATP6V0CP27449 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
ATP6V0CP27449 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
ATP6V0CP27449 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
ATP6V0CP27449 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC17.33■□□□□ 0.36
ATP6V0CP27449 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC17.33■□□□□ 0.36
ATP6V0CP27449 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ATP6V0CP27449 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
ATP6V0CP27449 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ATP6V0CP27449 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
ATP6V0CP27449 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
ATP6V0CP27449 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
ATP6V0CP27449 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
ATP6V0CP27449 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATP6V0CP27449 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATP6V0CP27449 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
ATP6V0CP27449 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
ATP6V0CP27449 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC17.32■□□□□ 0.36
ATP6V0CP27449 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms