Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 AC019069.1-201ENST00000610008 1333 ntBASIC18.29■□□□□ 0.52
LMO1P25800 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC18.29■□□□□ 0.52
LMO1P25800 STX4-202ENST00000394998 1498 ntTSL 2 BASIC18.29■□□□□ 0.52
LMO1P25800 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
LMO1P25800 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC18.29■□□□□ 0.52
LMO1P25800 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC18.29■□□□□ 0.52
LMO1P25800 AL138724.1-201ENST00000606771 1088 ntBASIC18.29■□□□□ 0.52
LMO1P25800 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC18.29■□□□□ 0.52
LMO1P25800 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
LMO1P25800 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
LMO1P25800 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LMO1P25800 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LMO1P25800 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
LMO1P25800 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
LMO1P25800 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LMO1P25800 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LMO1P25800 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LMO1P25800 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
LMO1P25800 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC18.28■□□□□ 0.52
LMO1P25800 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
LMO1P25800 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
LMO1P25800 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
LMO1P25800 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LMO1P25800 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC18.28■□□□□ 0.52
LMO1P25800 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LMO1P25800 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LMO1P25800 AC068587.7-201ENST00000641602 218 ntBASIC18.28■□□□□ 0.52
LMO1P25800 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC18.28■□□□□ 0.52
LMO1P25800 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
LMO1P25800 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
LMO1P25800 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LMO1P25800 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
LMO1P25800 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC18.28■□□□□ 0.52
LMO1P25800 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC18.27■□□□□ 0.52
LMO1P25800 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
LMO1P25800 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
LMO1P25800 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC18.27■□□□□ 0.52
LMO1P25800 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
LMO1P25800 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LMO1P25800 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC18.27■□□□□ 0.52
LMO1P25800 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
LMO1P25800 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
LMO1P25800 OR2I1P-207ENST00000453522 948 ntBASIC18.27■□□□□ 0.52
LMO1P25800 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC18.27■□□□□ 0.52
LMO1P25800 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC18.27■□□□□ 0.52
LMO1P25800 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC18.27■□□□□ 0.52
LMO1P25800 TRIR-202ENST00000588213 841 ntTSL 3 BASIC18.27■□□□□ 0.52
LMO1P25800 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC18.27■□□□□ 0.52
LMO1P25800 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
LMO1P25800 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LMO1P25800 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LMO1P25800 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
LMO1P25800 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.51
LMO1P25800 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC18.27■□□□□ 0.51
LMO1P25800 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.51
LMO1P25800 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
LMO1P25800 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.51
LMO1P25800 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LMO1P25800 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC18.26■□□□□ 0.51
LMO1P25800 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
LMO1P25800 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
LMO1P25800 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
LMO1P25800 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
LMO1P25800 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LMO1P25800 MTURN-203ENST00000409688 843 ntTSL 2 BASIC18.26■□□□□ 0.51
LMO1P25800 AC131281.2-201ENST00000520478 145 ntBASIC18.26■□□□□ 0.51
LMO1P25800 SF1-220ENST00000626028 704 ntTSL 2 BASIC18.26■□□□□ 0.51
LMO1P25800 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC18.26■□□□□ 0.51
LMO1P25800 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LMO1P25800 C11orf96-202ENST00000528572 1834 ntBASIC18.26■□□□□ 0.51
LMO1P25800 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC18.25■□□□□ 0.51
LMO1P25800 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LMO1P25800 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LMO1P25800 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC18.25■□□□□ 0.51
LMO1P25800 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LMO1P25800 USP45-205ENST00000472914 1617 ntTSL 5 BASIC18.25■□□□□ 0.51
LMO1P25800 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC18.25■□□□□ 0.51
LMO1P25800 HES6-206ENST00000409574 738 ntTSL 2 BASIC18.25■□□□□ 0.51
LMO1P25800 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
LMO1P25800 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
LMO1P25800 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LMO1P25800 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC18.25■□□□□ 0.51
LMO1P25800 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LMO1P25800 SYT6-210ENST00000641643 1587 ntBASIC18.25■□□□□ 0.51
LMO1P25800 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LMO1P25800 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LMO1P25800 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LMO1P25800 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
LMO1P25800 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LMO1P25800 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LMO1P25800 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LMO1P25800 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LMO1P25800 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LMO1P25800 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LMO1P25800 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC18.24■□□□□ 0.51
LMO1P25800 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
LMO1P25800 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
LMO1P25800 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC18.24■□□□□ 0.51
LMO1P25800 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LMO1P25800 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms