Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
XPAP23025 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
XPAP23025 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
XPAP23025 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC21.91■■□□□ 1.1
XPAP23025 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
XPAP23025 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
XPAP23025 MPST-204ENST00000404393 1329 ntTSL 5 BASIC21.91■■□□□ 1.1
XPAP23025 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
XPAP23025 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
XPAP23025 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
XPAP23025 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
XPAP23025 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
XPAP23025 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
XPAP23025 OXCT2P1-201ENST00000447263 1535 ntBASIC21.9■■□□□ 1.1
XPAP23025 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
XPAP23025 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
XPAP23025 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.9■■□□□ 1.1
XPAP23025 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC21.9■■□□□ 1.1
XPAP23025 MFF-208ENST00000409616 1247 ntTSL 5 BASIC21.9■■□□□ 1.1
XPAP23025 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC21.9■■□□□ 1.1
XPAP23025 MIR5787-201ENST00000611784 55 ntBASIC21.9■■□□□ 1.1
XPAP23025 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
XPAP23025 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
XPAP23025 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
XPAP23025 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
XPAP23025 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC21.9■■□□□ 1.1
XPAP23025 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC21.9■■□□□ 1.1
XPAP23025 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.9■■□□□ 1.1
XPAP23025 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
XPAP23025 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC21.89■■□□□ 1.09
XPAP23025 AC026271.2-201ENST00000428091 497 ntBASIC21.89■■□□□ 1.09
XPAP23025 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC21.89■■□□□ 1.09
XPAP23025 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC21.89■■□□□ 1.09
XPAP23025 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC21.89■■□□□ 1.09
XPAP23025 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
XPAP23025 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
XPAP23025 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC21.89■■□□□ 1.09
XPAP23025 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21.88■■□□□ 1.09
XPAP23025 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.88■■□□□ 1.09
XPAP23025 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
XPAP23025 AC097381.1-201ENST00000429019 1296 ntBASIC21.88■■□□□ 1.09
XPAP23025 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
XPAP23025 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC21.88■■□□□ 1.09
XPAP23025 MIR6821-201ENST00000617625 74 ntBASIC21.88■■□□□ 1.09
XPAP23025 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
XPAP23025 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
XPAP23025 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
XPAP23025 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
XPAP23025 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
XPAP23025 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
XPAP23025 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC21.87■■□□□ 1.09
XPAP23025 NT5C3AP1-201ENST00000394500 1012 ntBASIC21.87■■□□□ 1.09
XPAP23025 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC21.87■■□□□ 1.09
XPAP23025 AC027612.3-201ENST00000413684 1047 ntBASIC21.87■■□□□ 1.09
XPAP23025 YBX1P1-201ENST00000445822 960 ntBASIC21.87■■□□□ 1.09
XPAP23025 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
XPAP23025 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC21.87■■□□□ 1.09
XPAP23025 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC21.87■■□□□ 1.09
XPAP23025 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC21.87■■□□□ 1.09
XPAP23025 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
XPAP23025 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
XPAP23025 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
XPAP23025 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
XPAP23025 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.86■■□□□ 1.09
XPAP23025 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
XPAP23025 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
XPAP23025 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC21.86■■□□□ 1.09
XPAP23025 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
XPAP23025 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
XPAP23025 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
XPAP23025 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
XPAP23025 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC21.85■■□□□ 1.09
XPAP23025 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
XPAP23025 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
XPAP23025 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC21.85■■□□□ 1.09
XPAP23025 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
XPAP23025 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
XPAP23025 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
XPAP23025 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
XPAP23025 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC21.85■■□□□ 1.09
XPAP23025 PLD4-205ENST00000553861 667 ntTSL 2 BASIC21.85■■□□□ 1.09
XPAP23025 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC21.85■■□□□ 1.09
XPAP23025 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC21.85■■□□□ 1.09
XPAP23025 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
XPAP23025 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
XPAP23025 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
XPAP23025 GCA-201ENST00000233612 1694 ntTSL 2 BASIC21.85■■□□□ 1.09
XPAP23025 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
XPAP23025 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
XPAP23025 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
XPAP23025 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
XPAP23025 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
XPAP23025 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC21.84■■□□□ 1.09
XPAP23025 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
XPAP23025 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
XPAP23025 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC21.84■■□□□ 1.09
XPAP23025 AC087623.3-201ENST00000607047 1098 ntBASIC21.84■■□□□ 1.09
XPAP23025 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
XPAP23025 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
XPAP23025 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.84■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms