Protein–RNA interactions for Protein: P10827

THRA, Thyroid hormone receptor alpha, humanhuman

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THRAP10827 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
THRAP10827 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
THRAP10827 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
THRAP10827 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.73■■□□□ 1.07
THRAP10827 VGF-203ENST00000611537 1622 ntTSL 5 BASIC21.73■■□□□ 1.07
THRAP10827 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
THRAP10827 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
THRAP10827 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
THRAP10827 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
THRAP10827 RBM38-205ENST00000440234 686 ntTSL 2 BASIC21.73■■□□□ 1.07
THRAP10827 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC21.73■■□□□ 1.07
THRAP10827 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC21.73■■□□□ 1.07
THRAP10827 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
THRAP10827 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.07
THRAP10827 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC21.72■■□□□ 1.07
THRAP10827 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
THRAP10827 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.72■■□□□ 1.07
THRAP10827 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.72■■□□□ 1.07
THRAP10827 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
THRAP10827 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
THRAP10827 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.72■■□□□ 1.07
THRAP10827 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.71■■□□□ 1.07
THRAP10827 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
THRAP10827 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
THRAP10827 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
THRAP10827 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
THRAP10827 EI24-204ENST00000527235 1625 ntTSL 5 BASIC21.71■■□□□ 1.07
THRAP10827 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC21.71■■□□□ 1.07
THRAP10827 MIR3181-201ENST00000578512 73 ntBASIC21.71■■□□□ 1.07
THRAP10827 AC008764.7-201ENST00000593779 1081 ntBASIC21.71■■□□□ 1.07
THRAP10827 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC21.71■■□□□ 1.07
THRAP10827 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
THRAP10827 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
THRAP10827 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
THRAP10827 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
THRAP10827 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
THRAP10827 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC21.71■■□□□ 1.07
THRAP10827 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.07
THRAP10827 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.7■■□□□ 1.07
THRAP10827 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
THRAP10827 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
THRAP10827 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
THRAP10827 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
THRAP10827 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC21.7■■□□□ 1.06
THRAP10827 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
THRAP10827 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
THRAP10827 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.7■■□□□ 1.06
THRAP10827 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
THRAP10827 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.7■■□□□ 1.06
THRAP10827 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
THRAP10827 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.7■■□□□ 1.06
THRAP10827 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
THRAP10827 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.69■■□□□ 1.06
THRAP10827 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
THRAP10827 AC099791.1-201ENST00000416440 715 ntBASIC21.69■■□□□ 1.06
THRAP10827 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC21.69■■□□□ 1.06
THRAP10827 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC21.69■■□□□ 1.06
THRAP10827 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
THRAP10827 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
THRAP10827 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
THRAP10827 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
THRAP10827 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
THRAP10827 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
THRAP10827 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
THRAP10827 MIR5787-201ENST00000611784 55 ntBASIC21.68■■□□□ 1.06
THRAP10827 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
THRAP10827 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
THRAP10827 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
THRAP10827 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.68■■□□□ 1.06
THRAP10827 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.68■■□□□ 1.06
THRAP10827 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
THRAP10827 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.68■■□□□ 1.06
THRAP10827 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
THRAP10827 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.67■■□□□ 1.06
THRAP10827 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
THRAP10827 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.67■■□□□ 1.06
THRAP10827 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.67■■□□□ 1.06
THRAP10827 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
THRAP10827 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
THRAP10827 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.67■■□□□ 1.06
THRAP10827 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
THRAP10827 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
THRAP10827 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC21.67■■□□□ 1.06
THRAP10827 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.67■■□□□ 1.06
THRAP10827 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.67■■□□□ 1.06
THRAP10827 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
THRAP10827 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
THRAP10827 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
THRAP10827 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
THRAP10827 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
THRAP10827 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
THRAP10827 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
THRAP10827 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
THRAP10827 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
THRAP10827 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC21.66■■□□□ 1.06
THRAP10827 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC21.66■■□□□ 1.06
THRAP10827 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.66■■□□□ 1.06
THRAP10827 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
THRAP10827 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
THRAP10827 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms