Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 UBE2DNL-204ENST00000602536 740 ntBASIC29.08■■■□□ 2.25
CSB-PGBD3P0DP91 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
CSB-PGBD3P0DP91 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
CSB-PGBD3P0DP91 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC29.08■■■□□ 2.25
CSB-PGBD3P0DP91 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC29.08■■■□□ 2.25
CSB-PGBD3P0DP91 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
CSB-PGBD3P0DP91 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC29.07■■■□□ 2.24
CSB-PGBD3P0DP91 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC29.07■■■□□ 2.24
CSB-PGBD3P0DP91 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
CSB-PGBD3P0DP91 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC29.07■■■□□ 2.24
CSB-PGBD3P0DP91 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC29.07■■■□□ 2.24
CSB-PGBD3P0DP91 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC29.07■■■□□ 2.24
CSB-PGBD3P0DP91 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC29.07■■■□□ 2.24
CSB-PGBD3P0DP91 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC29.06■■■□□ 2.24
CSB-PGBD3P0DP91 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC29.06■■■□□ 2.24
CSB-PGBD3P0DP91 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC29.06■■■□□ 2.24
CSB-PGBD3P0DP91 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
CSB-PGBD3P0DP91 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
CSB-PGBD3P0DP91 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC29.06■■■□□ 2.24
CSB-PGBD3P0DP91 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC29.06■■■□□ 2.24
CSB-PGBD3P0DP91 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
CSB-PGBD3P0DP91 LINC01124-201ENST00000409786 2117 ntBASIC29.06■■■□□ 2.24
CSB-PGBD3P0DP91 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC29.06■■■□□ 2.24
CSB-PGBD3P0DP91 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
CSB-PGBD3P0DP91 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
CSB-PGBD3P0DP91 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC29.05■■■□□ 2.24
CSB-PGBD3P0DP91 AC009237.3-201ENST00000393279 1427 ntBASIC29.05■■■□□ 2.24
CSB-PGBD3P0DP91 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC29.05■■■□□ 2.24
CSB-PGBD3P0DP91 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC29.05■■■□□ 2.24
CSB-PGBD3P0DP91 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC29.05■■■□□ 2.24
CSB-PGBD3P0DP91 KRT18P6-201ENST00000555540 1265 ntBASIC29.05■■■□□ 2.24
CSB-PGBD3P0DP91 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC29.05■■■□□ 2.24
CSB-PGBD3P0DP91 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC29.05■■■□□ 2.24
CSB-PGBD3P0DP91 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
CSB-PGBD3P0DP91 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
CSB-PGBD3P0DP91 AC004812.2-201ENST00000611079 2094 ntBASIC29.05■■■□□ 2.24
CSB-PGBD3P0DP91 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC29.04■■■□□ 2.24
CSB-PGBD3P0DP91 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC29.04■■■□□ 2.24
CSB-PGBD3P0DP91 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC29.04■■■□□ 2.24
CSB-PGBD3P0DP91 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
CSB-PGBD3P0DP91 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
CSB-PGBD3P0DP91 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC29.04■■■□□ 2.24
CSB-PGBD3P0DP91 KLF13-207ENST00000560473 489 ntTSL 3 BASIC29.04■■■□□ 2.24
CSB-PGBD3P0DP91 AL138781.1-201ENST00000566567 1274 ntBASIC29.04■■■□□ 2.24
CSB-PGBD3P0DP91 H19-210ENST00000439725 1929 ntTSL 2 BASIC29.04■■■□□ 2.24
CSB-PGBD3P0DP91 LINC00543-201ENST00000567234 1845 ntBASIC29.04■■■□□ 2.24
CSB-PGBD3P0DP91 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC29.03■■■□□ 2.24
CSB-PGBD3P0DP91 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
CSB-PGBD3P0DP91 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC29.03■■■□□ 2.24
CSB-PGBD3P0DP91 GUSBP6-202ENST00000438529 1198 ntBASIC29.03■■■□□ 2.24
CSB-PGBD3P0DP91 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC29.03■■■□□ 2.24
CSB-PGBD3P0DP91 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC29.03■■■□□ 2.24
CSB-PGBD3P0DP91 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC29.03■■■□□ 2.24
CSB-PGBD3P0DP91 SLC7A5P2-201ENST00000553010 536 ntBASIC29.03■■■□□ 2.24
CSB-PGBD3P0DP91 AC066615.1-201ENST00000640911 628 ntBASIC29.03■■■□□ 2.24
CSB-PGBD3P0DP91 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
CSB-PGBD3P0DP91 CREM-210ENST00000374721 2020 ntTSL 5 BASIC29.03■■■□□ 2.24
CSB-PGBD3P0DP91 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC29.02■■■□□ 2.24
CSB-PGBD3P0DP91 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC29.02■■■□□ 2.24
CSB-PGBD3P0DP91 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC29.02■■■□□ 2.24
CSB-PGBD3P0DP91 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC29.02■■■□□ 2.24
CSB-PGBD3P0DP91 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC29.02■■■□□ 2.24
CSB-PGBD3P0DP91 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC29.02■■■□□ 2.24
CSB-PGBD3P0DP91 METTL15-202ENST00000403099 795 ntTSL 5 BASIC29.02■■■□□ 2.24
CSB-PGBD3P0DP91 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC29.02■■■□□ 2.24
CSB-PGBD3P0DP91 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC29.02■■■□□ 2.24
CSB-PGBD3P0DP91 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC29.02■■■□□ 2.24
CSB-PGBD3P0DP91 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC29.02■■■□□ 2.24
CSB-PGBD3P0DP91 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC29.02■■■□□ 2.24
CSB-PGBD3P0DP91 TFG-210ENST00000620299 1289 ntTSL 5 BASIC29.02■■■□□ 2.24
CSB-PGBD3P0DP91 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC29.02■■■□□ 2.24
CSB-PGBD3P0DP91 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
CSB-PGBD3P0DP91 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC29.01■■■□□ 2.23
CSB-PGBD3P0DP91 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC29.01■■■□□ 2.23
CSB-PGBD3P0DP91 SLC29A4P1-201ENST00000398760 971 ntBASIC29.01■■■□□ 2.23
CSB-PGBD3P0DP91 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC29.01■■■□□ 2.23
CSB-PGBD3P0DP91 PXK-203ENST00000383715 1756 ntTSL 5 BASIC29.01■■■□□ 2.23
CSB-PGBD3P0DP91 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC29■■■□□ 2.23
CSB-PGBD3P0DP91 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC29■■■□□ 2.23
CSB-PGBD3P0DP91 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC29■■■□□ 2.23
CSB-PGBD3P0DP91 OAS3-207ENST00000551007 998 ntTSL 2 BASIC29■■■□□ 2.23
CSB-PGBD3P0DP91 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC29■■■□□ 2.23
CSB-PGBD3P0DP91 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC29■■■□□ 2.23
CSB-PGBD3P0DP91 DUSP8P3-201ENST00000399571 1760 ntBASIC29■■■□□ 2.23
CSB-PGBD3P0DP91 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC29■■■□□ 2.23
CSB-PGBD3P0DP91 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC29■■■□□ 2.23
CSB-PGBD3P0DP91 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC28.99■■■□□ 2.23
CSB-PGBD3P0DP91 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC28.99■■■□□ 2.23
CSB-PGBD3P0DP91 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC28.99■■■□□ 2.23
CSB-PGBD3P0DP91 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC28.99■■■□□ 2.23
CSB-PGBD3P0DP91 BRI3-207ENST00000539286 699 ntTSL 2 BASIC28.99■■■□□ 2.23
CSB-PGBD3P0DP91 AP001160.3-201ENST00000601484 763 ntBASIC28.99■■■□□ 2.23
CSB-PGBD3P0DP91 PFKL-212ENST00000628044 129 ntTSL 3 BASIC28.99■■■□□ 2.23
CSB-PGBD3P0DP91 PARP1-210ENST00000629232 477 ntTSL 5 BASIC28.99■■■□□ 2.23
CSB-PGBD3P0DP91 MYCNOS-205ENST00000641950 531 ntBASIC28.99■■■□□ 2.23
CSB-PGBD3P0DP91 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC28.99■■■□□ 2.23
CSB-PGBD3P0DP91 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC28.99■■■□□ 2.23
CSB-PGBD3P0DP91 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC28.98■■■□□ 2.23
CSB-PGBD3P0DP91 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC28.98■■■□□ 2.23
CSB-PGBD3P0DP91 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms