Protein–RNA interactions for Protein: P0C7X3

CCNYL3, Putative cyclin-Y-like protein 3, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL3P0C7X3 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCNYL3P0C7X3 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCNYL3P0C7X3 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCNYL3P0C7X3 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCNYL3P0C7X3 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.91■□□□□ 0.94
CCNYL3P0C7X3 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
CCNYL3P0C7X3 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCNYL3P0C7X3 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CCNYL3P0C7X3 DUX4L2-201ENST00000561772 1275 ntBASIC20.91■□□□□ 0.94
CCNYL3P0C7X3 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CCNYL3P0C7X3 AL137784.2-201ENST00000607332 1000 ntBASIC20.91■□□□□ 0.94
CCNYL3P0C7X3 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.91■□□□□ 0.94
CCNYL3P0C7X3 DUX4L6-201ENST00000626483 1275 ntBASIC20.91■□□□□ 0.94
CCNYL3P0C7X3 DUX4L1-201ENST00000627662 1275 ntBASIC20.91■□□□□ 0.94
CCNYL3P0C7X3 DUX4L8-201ENST00000629013 1275 ntBASIC20.91■□□□□ 0.94
CCNYL3P0C7X3 DUX4L3-201ENST00000630187 1275 ntBASIC20.91■□□□□ 0.94
CCNYL3P0C7X3 DUX4L7-201ENST00000630678 1275 ntBASIC20.91■□□□□ 0.94
CCNYL3P0C7X3 DUX4L5-201ENST00000630834 1275 ntBASIC20.91■□□□□ 0.94
CCNYL3P0C7X3 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC20.91■□□□□ 0.94
CCNYL3P0C7X3 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCNYL3P0C7X3 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCNYL3P0C7X3 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
CCNYL3P0C7X3 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCNYL3P0C7X3 AC092068.2-201ENST00000590491 1708 ntBASIC20.9■□□□□ 0.94
CCNYL3P0C7X3 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.9■□□□□ 0.94
CCNYL3P0C7X3 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CCNYL3P0C7X3 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCNYL3P0C7X3 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCNYL3P0C7X3 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCNYL3P0C7X3 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCNYL3P0C7X3 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CCNYL3P0C7X3 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.9■□□□□ 0.94
CCNYL3P0C7X3 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
CCNYL3P0C7X3 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCNYL3P0C7X3 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCNYL3P0C7X3 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCNYL3P0C7X3 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
CCNYL3P0C7X3 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.89■□□□□ 0.94
CCNYL3P0C7X3 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CCNYL3P0C7X3 LINC02228-203ENST00000641970 1355 ntBASIC20.89■□□□□ 0.93
CCNYL3P0C7X3 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCNYL3P0C7X3 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CCNYL3P0C7X3 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.89■□□□□ 0.93
CCNYL3P0C7X3 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
CCNYL3P0C7X3 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CCNYL3P0C7X3 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC20.89■□□□□ 0.93
CCNYL3P0C7X3 AC105233.4-201ENST00000642045 216 ntBASIC20.89■□□□□ 0.93
CCNYL3P0C7X3 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.89■□□□□ 0.93
CCNYL3P0C7X3 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.89■□□□□ 0.93
CCNYL3P0C7X3 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCNYL3P0C7X3 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.89■□□□□ 0.93
CCNYL3P0C7X3 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCNYL3P0C7X3 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CCNYL3P0C7X3 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCNYL3P0C7X3 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCNYL3P0C7X3 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCNYL3P0C7X3 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCNYL3P0C7X3 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCNYL3P0C7X3 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC20.88■□□□□ 0.93
CCNYL3P0C7X3 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCNYL3P0C7X3 GXYLT1P2-201ENST00000433312 1230 ntBASIC20.88■□□□□ 0.93
CCNYL3P0C7X3 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CCNYL3P0C7X3 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CCNYL3P0C7X3 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCNYL3P0C7X3 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.88■□□□□ 0.93
CCNYL3P0C7X3 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
CCNYL3P0C7X3 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCNYL3P0C7X3 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCNYL3P0C7X3 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCNYL3P0C7X3 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.87■□□□□ 0.93
CCNYL3P0C7X3 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCNYL3P0C7X3 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.87■□□□□ 0.93
CCNYL3P0C7X3 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC20.87■□□□□ 0.93
CCNYL3P0C7X3 CCDC92B-201ENST00000575506 885 ntBASIC20.87■□□□□ 0.93
CCNYL3P0C7X3 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC20.87■□□□□ 0.93
CCNYL3P0C7X3 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
CCNYL3P0C7X3 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
CCNYL3P0C7X3 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.87■□□□□ 0.93
CCNYL3P0C7X3 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.87■□□□□ 0.93
CCNYL3P0C7X3 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CCNYL3P0C7X3 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCNYL3P0C7X3 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCNYL3P0C7X3 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
CCNYL3P0C7X3 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCNYL3P0C7X3 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
CCNYL3P0C7X3 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.86■□□□□ 0.93
CCNYL3P0C7X3 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCNYL3P0C7X3 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
CCNYL3P0C7X3 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC20.86■□□□□ 0.93
CCNYL3P0C7X3 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.86■□□□□ 0.93
CCNYL3P0C7X3 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC20.86■□□□□ 0.93
CCNYL3P0C7X3 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
CCNYL3P0C7X3 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CCNYL3P0C7X3 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC20.86■□□□□ 0.93
CCNYL3P0C7X3 KRT18P14-201ENST00000534205 1250 ntBASIC20.86■□□□□ 0.93
CCNYL3P0C7X3 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.86■□□□□ 0.93
CCNYL3P0C7X3 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.86■□□□□ 0.93
CCNYL3P0C7X3 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CCNYL3P0C7X3 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCNYL3P0C7X3 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms