Protein–RNA interactions for Protein: P0C2J7

TY4B-H, Transposon Ty4-H Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,802 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY4B-HP0C2J7 RSM24YDR175C 960 nt3.64□□□□□ -1.83
TY4B-HP0C2J7 TOS8YGL096W 831 nt3.64□□□□□ -1.83
TY4B-HP0C2J7 PAU23YLR037C 375 nt3.64□□□□□ -1.83
TY4B-HP0C2J7 TSR1YDL060W 2367 nt3.63□□□□□ -1.83
TY4B-HP0C2J7 RPO26YPR187W 468 nt3.63□□□□□ -1.83
TY4B-HP0C2J7 ENA5YDR038C 3276 nt3.63□□□□□ -1.83
TY4B-HP0C2J7 GCD1YOR260W 1737 nt3.63□□□□□ -1.83
TY4B-HP0C2J7 MBP1YDL056W 2502 nt3.63□□□□□ -1.83
TY4B-HP0C2J7 DDI3YNL335W 678 nt3.63□□□□□ -1.83
TY4B-HP0C2J7 YLR352WYLR352W 2424 nt3.62□□□□□ -1.83
TY4B-HP0C2J7 FRE7YOL152W 1863 nt3.62□□□□□ -1.83
TY4B-HP0C2J7 UBC1YDR177W 648 nt3.62□□□□□ -1.83
TY4B-HP0C2J7 YHL005CYHL005C 393 nt3.62□□□□□ -1.83
TY4B-HP0C2J7 RPL17AYKL180W 555 nt3.62□□□□□ -1.83
TY4B-HP0C2J7 YFL040WYFL040W 1623 nt3.62□□□□□ -1.83
TY4B-HP0C2J7 TFB4YPR056W 1017 nt3.61□□□□□ -1.83
TY4B-HP0C2J7 SMC6YLR383W 3345 nt3.61□□□□□ -1.83
TY4B-HP0C2J7 YRM1YOR172W 2361 nt3.61□□□□□ -1.83
TY4B-HP0C2J7 TCO89YPL180W 2400 nt3.61□□□□□ -1.83
TY4B-HP0C2J7 RTT103YDR289C 1230 nt3.6□□□□□ -1.83
TY4B-HP0C2J7 YBR298C-AYBR298C-A 222 nt3.6□□□□□ -1.83
TY4B-HP0C2J7 CWH41YGL027C 2502 nt3.6□□□□□ -1.83
TY4B-HP0C2J7 SPO16YHR153C 597 nt3.6□□□□□ -1.83
TY4B-HP0C2J7 YOR385WYOR385W 873 nt3.6□□□□□ -1.83
TY4B-HP0C2J7 KAR4YCL055W 1008 nt3.6□□□□□ -1.83
TY4B-HP0C2J7 NFT1YKR103W 3657 nt3.6□□□□□ -1.83
TY4B-HP0C2J7 YGR122WYGR122W 1209 nt3.59□□□□□ -1.83
TY4B-HP0C2J7 YHR214C-EYHR214C-E 300 nt3.59□□□□□ -1.83
TY4B-HP0C2J7 YAR070CYAR070C 300 nt3.59□□□□□ -1.83
TY4B-HP0C2J7 LDS2YOL047C 1071 nt3.59□□□□□ -1.83
TY4B-HP0C2J7 YHR078WYHR078W 1659 nt3.59□□□□□ -1.83
TY4B-HP0C2J7 PTP3YER075C 2787 nt3.59□□□□□ -1.83
TY4B-HP0C2J7 MDM30YLR368W 1797 nt3.59□□□□□ -1.84
TY4B-HP0C2J7 CDC6YJL194W 1542 nt3.59□□□□□ -1.84
TY4B-HP0C2J7 STV1YMR054W 2673 nt3.59□□□□□ -1.84
TY4B-HP0C2J7 PET54YGR222W 882 nt3.58□□□□□ -1.84
TY4B-HP0C2J7 CCW14YLR390W-A 717 nt3.58□□□□□ -1.84
TY4B-HP0C2J7 RPL23AYBL087C 414 nt3.58□□□□□ -1.84
TY4B-HP0C2J7 RAD17YOR368W 1206 nt3.58□□□□□ -1.84
TY4B-HP0C2J7 PMS1YNL082W 2622 nt3.58□□□□□ -1.84
TY4B-HP0C2J7 RPS22AYJL190C 393 nt3.58□□□□□ -1.84
TY4B-HP0C2J7 OM14YBR230C 405 nt3.57□□□□□ -1.84
TY4B-HP0C2J7 SLP1YOR154W 1764 nt3.57□□□□□ -1.84
TY4B-HP0C2J7 TRK1YJL129C 3708 nt3.57□□□□□ -1.84
TY4B-HP0C2J7 FCF1YDR339C 570 nt3.56□□□□□ -1.84
TY4B-HP0C2J7 AIM25YJR100C 984 nt3.56□□□□□ -1.84
TY4B-HP0C2J7 GRS2YPR081C 1857 nt3.56□□□□□ -1.84
TY4B-HP0C2J7 STP2YHR006W 1626 nt3.56□□□□□ -1.84
TY4B-HP0C2J7 VEL1YGL258W 621 nt3.56□□□□□ -1.84
TY4B-HP0C2J7 TIS11YLR136C 858 nt3.56□□□□□ -1.84
TY4B-HP0C2J7 SFH1YLR321C 1281 nt3.56□□□□□ -1.84
TY4B-HP0C2J7 YCL023CYCL023C 348 nt3.56□□□□□ -1.84
TY4B-HP0C2J7 ATP5YDR298C 639 nt3.55□□□□□ -1.84
TY4B-HP0C2J7 SPT4YGR063C 309 nt3.55□□□□□ -1.84
TY4B-HP0C2J7 YKL107WYKL107W 930 nt3.55□□□□□ -1.84
TY4B-HP0C2J7 EMC6YLL014W 327 nt3.55□□□□□ -1.84
TY4B-HP0C2J7 RPL6AYML073C 531 nt3.55□□□□□ -1.84
TY4B-HP0C2J7 OCA1YNL099C 717 nt3.55□□□□□ -1.84
TY4B-HP0C2J7 NEW1YPL226W 3591 nt3.55□□□□□ -1.84
TY4B-HP0C2J7 ATG21YPL100W 1491 nt3.54□□□□□ -1.84
TY4B-HP0C2J7 RTA1YGR213C 954 nt3.54□□□□□ -1.84
TY4B-HP0C2J7 PEX1YKL197C 3132 nt3.54□□□□□ -1.84
TY4B-HP0C2J7 YHR052W-AYHR052W-A 195 nt3.54□□□□□ -1.84
TY4B-HP0C2J7 YHR054W-AYHR054W-A 195 nt3.54□□□□□ -1.84
TY4B-HP0C2J7 RIM4YHL024W 2142 nt3.53□□□□□ -1.84
TY4B-HP0C2J7 PDR1YGL013C 3207 nt3.53□□□□□ -1.84
TY4B-HP0C2J7 AUS1YOR011W 4185 nt3.53□□□□□ -1.84
TY4B-HP0C2J7 THP2YHR167W 786 nt3.53□□□□□ -1.84
TY4B-HP0C2J7 ICY1YMR195W 384 nt3.53□□□□□ -1.84
TY4B-HP0C2J7 KTI11YBL071W-A 249 nt3.53□□□□□ -1.84
TY4B-HP0C2J7 CIT1YNR001C 1440 nt3.53□□□□□ -1.85
TY4B-HP0C2J7 DHH1YDL160C 1521 nt3.52□□□□□ -1.85
TY4B-HP0C2J7 MAK32YCR019W 1092 nt3.52□□□□□ -1.85
TY4B-HP0C2J7 CLB3YDL155W 1284 nt3.52□□□□□ -1.85
TY4B-HP0C2J7 AST2YER101C 1293 nt3.52□□□□□ -1.85
TY4B-HP0C2J7 SMA2YML066C 1110 nt3.52□□□□□ -1.85
TY4B-HP0C2J7 YOR186WYOR186W 435 nt3.52□□□□□ -1.85
TY4B-HP0C2J7 GUP1YGL084C 1683 nt3.52□□□□□ -1.85
TY4B-HP0C2J7 MAF1YDR005C 1188 nt3.51□□□□□ -1.85
TY4B-HP0C2J7 MPS2YGL075C 1164 nt3.51□□□□□ -1.85
TY4B-HP0C2J7 GCD6YDR211W 2139 nt3.51□□□□□ -1.85
TY4B-HP0C2J7 YDR274CYDR274C 372 nt3.51□□□□□ -1.85
TY4B-HP0C2J7 GYP7YDL234C 2241 nt3.51□□□□□ -1.85
TY4B-HP0C2J7 PHM6YDR281C 315 nt3.5□□□□□ -1.85
TY4B-HP0C2J7 YAP5YIR018W 738 nt3.5□□□□□ -1.85
TY4B-HP0C2J7 DAL2YIR029W 1032 nt3.5□□□□□ -1.85
TY4B-HP0C2J7 SAW1YAL027W 786 nt3.5□□□□□ -1.85
TY4B-HP0C2J7 YLR347W-AYLR347W-A 141 nt3.5□□□□□ -1.85
TY4B-HP0C2J7 SAM37YMR060C 984 nt3.5□□□□□ -1.85
TY4B-HP0C2J7 GRX6YDL010W 696 nt3.49□□□□□ -1.85
TY4B-HP0C2J7 YDR537CYDR537C 606 nt3.49□□□□□ -1.85
TY4B-HP0C2J7 tW(CCA)G1tW(CCA)G1 72 nt3.49□□□□□ -1.85
TY4B-HP0C2J7 tW(CCA)G2tW(CCA)G2 72 nt3.49□□□□□ -1.85
TY4B-HP0C2J7 tW(CCA)JtW(CCA)J 72 nt3.49□□□□□ -1.85
TY4B-HP0C2J7 tW(CCA)KtW(CCA)K 72 nt3.49□□□□□ -1.85
TY4B-HP0C2J7 tW(CCA)MtW(CCA)M 72 nt3.49□□□□□ -1.85
TY4B-HP0C2J7 tW(CCA)PtW(CCA)P 72 nt3.49□□□□□ -1.85
TY4B-HP0C2J7 YOR283WYOR283W 693 nt3.49□□□□□ -1.85
TY4B-HP0C2J7 Q0010Q0010 387 nt3.49□□□□□ -1.85
TY4B-HP0C2J7 YGR269WYGR269W 327 nt3.49□□□□□ -1.85
Retrieved 100 of 7,029 protein–RNA pairs in 82.2 ms