Protein–RNA interactions for Protein: P0C2J3

TY2B-LR1, Transposon Ty2-LR1 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,770 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY2B-LR1P0C2J3 SMF1YOL122C 1728 nt4.33□□□□□ -1.72
TY2B-LR1P0C2J3 YGL140CYGL140C 3660 nt4.33□□□□□ -1.72
TY2B-LR1P0C2J3 YEL025CYEL025C 3567 nt4.32□□□□□ -1.72
TY2B-LR1P0C2J3 WSS1YHR134W 810 nt4.32□□□□□ -1.72
TY2B-LR1P0C2J3 YAP5YIR018W 738 nt4.32□□□□□ -1.72
TY2B-LR1P0C2J3 EMC6YLL014W 327 nt4.32□□□□□ -1.72
TY2B-LR1P0C2J3 YOR338WYOR338W 1092 nt4.32□□□□□ -1.72
TY2B-LR1P0C2J3 MPC54YOR177C 1395 nt4.32□□□□□ -1.72
TY2B-LR1P0C2J3 COM2YER130C 1332 nt4.31□□□□□ -1.72
TY2B-LR1P0C2J3 GCR2YNL199C 1605 nt4.31□□□□□ -1.72
TY2B-LR1P0C2J3 ARP1YHR129C 1155 nt4.31□□□□□ -1.72
TY2B-LR1P0C2J3 CSR2YPR030W 3366 nt4.31□□□□□ -1.72
TY2B-LR1P0C2J3 IZH3YLR023C 1632 nt4.31□□□□□ -1.72
TY2B-LR1P0C2J3 RAD1YPL022W 3303 nt4.31□□□□□ -1.72
TY2B-LR1P0C2J3 SMA2YML066C 1110 nt4.3□□□□□ -1.72
TY2B-LR1P0C2J3 SDS23YGL056C 1584 nt4.3□□□□□ -1.72
TY2B-LR1P0C2J3 PUG1YER185W 912 nt4.3□□□□□ -1.72
TY2B-LR1P0C2J3 COX17YLL009C 210 nt4.3□□□□□ -1.72
TY2B-LR1P0C2J3 SAM37YMR060C 984 nt4.3□□□□□ -1.72
TY2B-LR1P0C2J3 YCL022CYCL022C 516 nt4.3□□□□□ -1.72
TY2B-LR1P0C2J3 PDR1YGL013C 3207 nt4.29□□□□□ -1.72
TY2B-LR1P0C2J3 tW(CCA)G1tW(CCA)G1 72 nt4.29□□□□□ -1.72
TY2B-LR1P0C2J3 tW(CCA)G2tW(CCA)G2 72 nt4.29□□□□□ -1.72
TY2B-LR1P0C2J3 tW(CCA)JtW(CCA)J 72 nt4.29□□□□□ -1.72
TY2B-LR1P0C2J3 tW(CCA)KtW(CCA)K 72 nt4.29□□□□□ -1.72
TY2B-LR1P0C2J3 tW(CCA)MtW(CCA)M 72 nt4.29□□□□□ -1.72
TY2B-LR1P0C2J3 tW(CCA)PtW(CCA)P 72 nt4.29□□□□□ -1.72
TY2B-LR1P0C2J3 YLR374CYLR374C 390 nt4.29□□□□□ -1.72
TY2B-LR1P0C2J3 RAD17YOR368W 1206 nt4.29□□□□□ -1.72
TY2B-LR1P0C2J3 OSW7YFR039C 1533 nt4.29□□□□□ -1.72
TY2B-LR1P0C2J3 MPS2YGL075C 1164 nt4.28□□□□□ -1.72
TY2B-LR1P0C2J3 CMD1YBR109C 444 nt4.28□□□□□ -1.72
TY2B-LR1P0C2J3 GCD1YOR260W 1737 nt4.28□□□□□ -1.72
TY2B-LR1P0C2J3 OSH2YDL019C 3852 nt4.28□□□□□ -1.72
TY2B-LR1P0C2J3 PHM6YDR281C 315 nt4.27□□□□□ -1.73
TY2B-LR1P0C2J3 YFR032C-BYFR032C-B 264 nt4.27□□□□□ -1.73
TY2B-LR1P0C2J3 YHR032W-AYHR032W-A 180 nt4.27□□□□□ -1.73
TY2B-LR1P0C2J3 SAP155YFR040W 3009 nt4.27□□□□□ -1.73
TY2B-LR1P0C2J3 STE11YLR362W 2154 nt4.27□□□□□ -1.73
TY2B-LR1P0C2J3 MNL1YHR204W 2391 nt4.26□□□□□ -1.73
TY2B-LR1P0C2J3 LNP1YHR192W 837 nt4.26□□□□□ -1.73
TY2B-LR1P0C2J3 ASG7YJL170C 630 nt4.26□□□□□ -1.73
TY2B-LR1P0C2J3 TIS11YLR136C 858 nt4.26□□□□□ -1.73
TY2B-LR1P0C2J3 YSH1YLR277C 2340 nt4.26□□□□□ -1.73
TY2B-LR1P0C2J3 VPS36YLR417W 1701 nt4.26□□□□□ -1.73
TY2B-LR1P0C2J3 YDR222WYDR222W 1248 nt4.25□□□□□ -1.73
TY2B-LR1P0C2J3 MPC3YGR243W 441 nt4.25□□□□□ -1.73
TY2B-LR1P0C2J3 YOR385WYOR385W 873 nt4.25□□□□□ -1.73
TY2B-LR1P0C2J3 RPL13AYDL082W 600 nt4.25□□□□□ -1.73
TY2B-LR1P0C2J3 DDI3YNL335W 678 nt4.25□□□□□ -1.73
TY2B-LR1P0C2J3 ATP4YPL078C 735 nt4.25□□□□□ -1.73
TY2B-LR1P0C2J3 SLP1YOR154W 1764 nt4.24□□□□□ -1.73
TY2B-LR1P0C2J3 RAM1YDL090C 1296 nt4.24□□□□□ -1.73
TY2B-LR1P0C2J3 SCP160YJL080C 3669 nt4.24□□□□□ -1.73
TY2B-LR1P0C2J3 YRM1YOR172W 2361 nt4.23□□□□□ -1.73
TY2B-LR1P0C2J3 DAL2YIR029W 1032 nt4.23□□□□□ -1.73
TY2B-LR1P0C2J3 UGA3YDL170W 1587 nt4.23□□□□□ -1.73
TY2B-LR1P0C2J3 STP2YHR006W 1626 nt4.23□□□□□ -1.73
TY2B-LR1P0C2J3 MHO1YJR008W 1017 nt4.22□□□□□ -1.73
TY2B-LR1P0C2J3 ANB1YJR047C 474 nt4.22□□□□□ -1.73
TY2B-LR1P0C2J3 RPL17AYKL180W 555 nt4.22□□□□□ -1.73
TY2B-LR1P0C2J3 YOR186WYOR186W 435 nt4.22□□□□□ -1.73
TY2B-LR1P0C2J3 ROK1YGL171W 1695 nt4.22□□□□□ -1.73
TY2B-LR1P0C2J3 ARP8YOR141C 2646 nt4.22□□□□□ -1.73
TY2B-LR1P0C2J3 SWR1YDR334W 4545 nt4.22□□□□□ -1.73
TY2B-LR1P0C2J3 THP2YHR167W 786 nt4.22□□□□□ -1.73
TY2B-LR1P0C2J3 YLR346CYLR346C 306 nt4.22□□□□□ -1.73
TY2B-LR1P0C2J3 RPL6AYML073C 531 nt4.22□□□□□ -1.73
TY2B-LR1P0C2J3 GIN4YDR507C 3429 nt4.21□□□□□ -1.73
TY2B-LR1P0C2J3 CNL1YDR357C 369 nt4.21□□□□□ -1.74
TY2B-LR1P0C2J3 AST2YER101C 1293 nt4.21□□□□□ -1.74
TY2B-LR1P0C2J3 PET54YGR222W 882 nt4.21□□□□□ -1.74
TY2B-LR1P0C2J3 LSM12YHR121W 564 nt4.21□□□□□ -1.74
TY2B-LR1P0C2J3 RPS22AYJL190C 393 nt4.21□□□□□ -1.74
TY2B-LR1P0C2J3 YLR347W-AYLR347W-A 141 nt4.21□□□□□ -1.74
TY2B-LR1P0C2J3 RTT10YPL183C 3042 nt4.21□□□□□ -1.74
TY2B-LR1P0C2J3 YJL132WYJL132W 2253 nt4.21□□□□□ -1.74
TY2B-LR1P0C2J3 HOS1YPR068C 1413 nt4.2□□□□□ -1.74
TY2B-LR1P0C2J3 AAD16YFL057C 459 nt4.2□□□□□ -1.74
TY2B-LR1P0C2J3 FMP33YJL161W 543 nt4.2□□□□□ -1.74
TY2B-LR1P0C2J3 SFH1YLR321C 1281 nt4.2□□□□□ -1.74
TY2B-LR1P0C2J3 RHO5YNL180C 996 nt4.2□□□□□ -1.74
TY2B-LR1P0C2J3 FZO1YBR179C 2568 nt4.2□□□□□ -1.74
TY2B-LR1P0C2J3 MNT4YNR059W 1743 nt4.2□□□□□ -1.74
TY2B-LR1P0C2J3 GYP7YDL234C 2241 nt4.2□□□□□ -1.74
TY2B-LR1P0C2J3 TFC4YGR047C 3078 nt4.2□□□□□ -1.74
TY2B-LR1P0C2J3 PRM15YMR278W 1869 nt4.2□□□□□ -1.74
TY2B-LR1P0C2J3 SNQ2YDR011W 4506 nt4.2□□□□□ -1.74
TY2B-LR1P0C2J3 MGM101YJR144W 810 nt4.19□□□□□ -1.74
TY2B-LR1P0C2J3 GSM1YJL103C 1857 nt4.18□□□□□ -1.74
TY2B-LR1P0C2J3 ABP140YOR239W 1887 nt4.18□□□□□ -1.74
TY2B-LR1P0C2J3 ERG28YER044C 447 nt4.18□□□□□ -1.74
TY2B-LR1P0C2J3 YGK3YOL128C 1128 nt4.18□□□□□ -1.74
TY2B-LR1P0C2J3 HOS3YPL116W 2094 nt4.18□□□□□ -1.74
TY2B-LR1P0C2J3 VTC3YPL019C 2508 nt4.17□□□□□ -1.74
TY2B-LR1P0C2J3 FMP25YLR077W 1752 nt4.17□□□□□ -1.74
TY2B-LR1P0C2J3 SEC26YDR238C 2922 nt4.17□□□□□ -1.74
TY2B-LR1P0C2J3 RPL13BYMR142C 600 nt4.17□□□□□ -1.74
TY2B-LR1P0C2J3 TSR1YDL060W 2367 nt4.17□□□□□ -1.74
TY2B-LR1P0C2J3 DHH1YDL160C 1521 nt4.17□□□□□ -1.74
Retrieved 100 of 7,029 protein–RNA pairs in 16.3 ms