Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.34■■□□□ 1.01
CAPN1P07384 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
CAPN1P07384 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CAPN1P07384 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
CAPN1P07384 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.34■■□□□ 1.01
CAPN1P07384 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CAPN1P07384 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CAPN1P07384 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CAPN1P07384 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CAPN1P07384 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CAPN1P07384 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CAPN1P07384 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
CAPN1P07384 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CAPN1P07384 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CAPN1P07384 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC21.34■■□□□ 1.01
CAPN1P07384 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CAPN1P07384 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CAPN1P07384 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
CAPN1P07384 AC011298.3-201ENST00000615796 283 ntBASIC21.34■■□□□ 1.01
CAPN1P07384 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
CAPN1P07384 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CAPN1P07384 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CAPN1P07384 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC21.34■■□□□ 1.01
CAPN1P07384 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.34■■□□□ 1.01
CAPN1P07384 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
CAPN1P07384 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CAPN1P07384 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CAPN1P07384 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.33■■□□□ 1.01
CAPN1P07384 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CAPN1P07384 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CAPN1P07384 AC006455.2-201ENST00000429931 906 ntBASIC21.33■■□□□ 1.01
CAPN1P07384 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC21.33■■□□□ 1.01
CAPN1P07384 AC241377.3-202ENST00000626088 1088 ntBASIC21.33■■□□□ 1.01
CAPN1P07384 AC241585.3-202ENST00000628937 1088 ntBASIC21.33■■□□□ 1.01
CAPN1P07384 AC245100.8-202ENST00000629247 1058 ntBASIC21.33■■□□□ 1.01
CAPN1P07384 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
CAPN1P07384 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.33■■□□□ 1
CAPN1P07384 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.33■■□□□ 1
CAPN1P07384 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CAPN1P07384 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.33■■□□□ 1
CAPN1P07384 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1
CAPN1P07384 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CAPN1P07384 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
CAPN1P07384 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CAPN1P07384 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.32■■□□□ 1
CAPN1P07384 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
CAPN1P07384 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CAPN1P07384 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC21.32■■□□□ 1
CAPN1P07384 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC21.32■■□□□ 1
CAPN1P07384 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
CAPN1P07384 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
CAPN1P07384 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.32■■□□□ 1
CAPN1P07384 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21.32■■□□□ 1
CAPN1P07384 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC21.32■■□□□ 1
CAPN1P07384 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CAPN1P07384 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CAPN1P07384 AC092053.2-201ENST00000640557 1818 ntBASIC21.32■■□□□ 1
CAPN1P07384 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.31■■□□□ 1
CAPN1P07384 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.31■■□□□ 1
CAPN1P07384 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.31■■□□□ 1
CAPN1P07384 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
CAPN1P07384 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CAPN1P07384 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
CAPN1P07384 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
CAPN1P07384 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC21.31■■□□□ 1
CAPN1P07384 AC105265.2-201ENST00000467189 838 ntBASIC21.31■■□□□ 1
CAPN1P07384 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.31■■□□□ 1
CAPN1P07384 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
CAPN1P07384 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
CAPN1P07384 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CAPN1P07384 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.31■■□□□ 1
CAPN1P07384 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.31■■□□□ 1
CAPN1P07384 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CAPN1P07384 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.31■■□□□ 1
CAPN1P07384 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.31■■□□□ 1
CAPN1P07384 LINC01960-201ENST00000563759 1884 ntBASIC21.3■■□□□ 1
CAPN1P07384 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
CAPN1P07384 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.3■■□□□ 1
CAPN1P07384 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CAPN1P07384 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
CAPN1P07384 VGF-203ENST00000611537 1622 ntTSL 5 BASIC21.3■■□□□ 1
CAPN1P07384 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.3■■□□□ 1
CAPN1P07384 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CAPN1P07384 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC21.3■■□□□ 1
CAPN1P07384 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC21.3■■□□□ 1
CAPN1P07384 MAG-206ENST00000597035 542 ntTSL 4 BASIC21.3■■□□□ 1
CAPN1P07384 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC21.3■■□□□ 1
CAPN1P07384 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC21.3■■□□□ 1
CAPN1P07384 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
CAPN1P07384 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
CAPN1P07384 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.29■■□□□ 1
CAPN1P07384 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC21.29■■□□□ 1
CAPN1P07384 AC004687.1-201ENST00000579003 1625 ntBASIC21.29■■□□□ 1
CAPN1P07384 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
CAPN1P07384 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.29■■□□□ 1
CAPN1P07384 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC21.29■■□□□ 1
CAPN1P07384 HES6-206ENST00000409574 738 ntTSL 2 BASIC21.29■■□□□ 1
CAPN1P07384 AC091305.1-201ENST00000479476 895 ntBASIC21.29■■□□□ 1
CAPN1P07384 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CAPN1P07384 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms