Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC23.24■■□□□ 1.31
RB1P06400 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
RB1P06400 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
RB1P06400 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC23.24■■□□□ 1.31
RB1P06400 AC073210.2-201ENST00000430369 194 ntBASIC23.24■■□□□ 1.31
RB1P06400 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC23.24■■□□□ 1.31
RB1P06400 MYCNOS-205ENST00000641950 531 ntBASIC23.24■■□□□ 1.31
RB1P06400 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC23.24■■□□□ 1.31
RB1P06400 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
RB1P06400 AC138932.3-201ENST00000567634 1902 ntBASIC23.23■■□□□ 1.31
RB1P06400 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
RB1P06400 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC23.23■■□□□ 1.31
RB1P06400 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
RB1P06400 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC23.23■■□□□ 1.31
RB1P06400 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC23.23■■□□□ 1.31
RB1P06400 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
RB1P06400 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC23.23■■□□□ 1.31
RB1P06400 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC23.23■■□□□ 1.31
RB1P06400 AC133041.1-202ENST00000642053 222 ntBASIC23.23■■□□□ 1.31
RB1P06400 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
RB1P06400 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
RB1P06400 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC23.23■■□□□ 1.31
RB1P06400 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
RB1P06400 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
RB1P06400 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
RB1P06400 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC23.22■■□□□ 1.31
RB1P06400 AC069152.1-201ENST00000438030 544 ntBASIC23.22■■□□□ 1.31
RB1P06400 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
RB1P06400 AP001160.3-201ENST00000601484 763 ntBASIC23.22■■□□□ 1.31
RB1P06400 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
RB1P06400 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
RB1P06400 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
RB1P06400 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
RB1P06400 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
RB1P06400 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
RB1P06400 FAM201B-201ENST00000458407 597 ntBASIC23.21■■□□□ 1.31
RB1P06400 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
RB1P06400 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC23.21■■□□□ 1.31
RB1P06400 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
RB1P06400 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
RB1P06400 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
RB1P06400 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC23.21■■□□□ 1.31
RB1P06400 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
RB1P06400 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
RB1P06400 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
RB1P06400 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
RB1P06400 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
RB1P06400 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
RB1P06400 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
RB1P06400 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
RB1P06400 AF201337.1-201ENST00000520239 748 ntBASIC23.2■■□□□ 1.3
RB1P06400 BRI3-207ENST00000539286 699 ntTSL 2 BASIC23.2■■□□□ 1.3
RB1P06400 AC133552.2-202ENST00000575694 574 ntBASIC23.2■■□□□ 1.3
RB1P06400 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC23.2■■□□□ 1.3
RB1P06400 MED17-227ENST00000640521 2047 ntTSL 5 BASIC23.2■■□□□ 1.3
RB1P06400 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
RB1P06400 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RB1P06400 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
RB1P06400 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC23.19■■□□□ 1.3
RB1P06400 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC23.19■■□□□ 1.3
RB1P06400 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
RB1P06400 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC23.19■■□□□ 1.3
RB1P06400 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC23.19■■□□□ 1.3
RB1P06400 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RB1P06400 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
RB1P06400 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
RB1P06400 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RB1P06400 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC23.19■■□□□ 1.3
RB1P06400 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RB1P06400 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
RB1P06400 MFF-207ENST00000409565 1548 ntTSL 2 BASIC23.18■■□□□ 1.3
RB1P06400 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RB1P06400 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
RB1P06400 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC23.18■■□□□ 1.3
RB1P06400 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
RB1P06400 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
RB1P06400 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
RB1P06400 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
RB1P06400 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RB1P06400 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
RB1P06400 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
RB1P06400 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
RB1P06400 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC23.17■■□□□ 1.3
RB1P06400 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC23.17■■□□□ 1.3
RB1P06400 MIR4651-201ENST00000582622 73 ntBASIC23.17■■□□□ 1.3
RB1P06400 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RB1P06400 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RB1P06400 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
RB1P06400 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC23.16■■□□□ 1.3
RB1P06400 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC23.16■■□□□ 1.3
RB1P06400 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC23.16■■□□□ 1.3
RB1P06400 KRT18P20-201ENST00000548986 1279 ntBASIC23.16■■□□□ 1.3
RB1P06400 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
RB1P06400 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC23.16■■□□□ 1.3
RB1P06400 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC23.16■■□□□ 1.3
RB1P06400 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RB1P06400 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
RB1P06400 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RB1P06400 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
RB1P06400 CNN2P6-201ENST00000439038 900 ntBASIC23.15■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms