Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TCRAP04437 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC16.53■□□□□ 0.24
TCRAP04437 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC16.53■□□□□ 0.24
TCRAP04437 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TCRAP04437 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
TCRAP04437 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
TCRAP04437 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
TCRAP04437 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TCRAP04437 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TCRAP04437 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC16.52■□□□□ 0.24
TCRAP04437 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TCRAP04437 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TCRAP04437 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC16.52■□□□□ 0.24
TCRAP04437 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC16.52■□□□□ 0.24
TCRAP04437 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC16.52■□□□□ 0.24
TCRAP04437 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC16.52■□□□□ 0.24
TCRAP04437 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC16.52■□□□□ 0.24
TCRAP04437 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TCRAP04437 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC16.52■□□□□ 0.24
TCRAP04437 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
TCRAP04437 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
TCRAP04437 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TCRAP04437 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC16.52■□□□□ 0.23
TCRAP04437 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
TCRAP04437 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC16.52■□□□□ 0.23
TCRAP04437 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TCRAP04437 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
TCRAP04437 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC16.52■□□□□ 0.23
TCRAP04437 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TCRAP04437 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TCRAP04437 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TCRAP04437 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC16.51■□□□□ 0.23
TCRAP04437 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC16.51■□□□□ 0.23
TCRAP04437 DUX4L4-201ENST00000566884 1269 ntBASIC16.51■□□□□ 0.23
TCRAP04437 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC16.51■□□□□ 0.23
TCRAP04437 CA15P2-201ENST00000611168 834 ntBASIC16.51■□□□□ 0.23
TCRAP04437 PVT1_1.1-201ENST00000615125 194 ntBASIC16.51■□□□□ 0.23
TCRAP04437 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TCRAP04437 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TCRAP04437 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TCRAP04437 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
TCRAP04437 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
TCRAP04437 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TCRAP04437 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TCRAP04437 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
TCRAP04437 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TCRAP04437 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TCRAP04437 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
TCRAP04437 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
TCRAP04437 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
TCRAP04437 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
TCRAP04437 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TCRAP04437 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TCRAP04437 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TCRAP04437 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC16.5■□□□□ 0.23
TCRAP04437 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC16.5■□□□□ 0.23
TCRAP04437 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TCRAP04437 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TCRAP04437 ASB1-202ENST00000409297 878 ntTSL 5 BASIC16.5■□□□□ 0.23
TCRAP04437 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC16.5■□□□□ 0.23
TCRAP04437 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
TCRAP04437 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TCRAP04437 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
TCRAP04437 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TCRAP04437 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TCRAP04437 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
TCRAP04437 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC16.5■□□□□ 0.23
TCRAP04437 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TCRAP04437 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
TCRAP04437 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TCRAP04437 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TCRAP04437 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC16.5■□□□□ 0.23
TCRAP04437 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TCRAP04437 AC005703.6-201ENST00000623265 1329 ntBASIC16.49■□□□□ 0.23
TCRAP04437 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TCRAP04437 TUB-203ENST00000534099 1759 ntTSL 2 BASIC16.49■□□□□ 0.23
TCRAP04437 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC16.49■□□□□ 0.23
TCRAP04437 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TCRAP04437 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TCRAP04437 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TCRAP04437 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC16.49■□□□□ 0.23
TCRAP04437 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
TCRAP04437 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TCRAP04437 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TCRAP04437 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC16.49■□□□□ 0.23
TCRAP04437 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC16.48■□□□□ 0.23
TCRAP04437 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TCRAP04437 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TCRAP04437 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TCRAP04437 Z98882.1-201ENST00000622160 2253 ntBASIC16.48■□□□□ 0.23
TCRAP04437 AC073130.3-201ENST00000624389 2278 ntBASIC16.48■□□□□ 0.23
TCRAP04437 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
TCRAP04437 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TCRAP04437 BEX3-202ENST00000372634 753 ntTSL 2 BASIC16.48■□□□□ 0.23
TCRAP04437 TK2-202ENST00000417693 1046 ntTSL 2 BASIC16.48■□□□□ 0.23
TCRAP04437 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC16.48■□□□□ 0.23
TCRAP04437 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TCRAP04437 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC16.48■□□□□ 0.23
TCRAP04437 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
TCRAP04437 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms