Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
MT-ND1P03886 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.45■□□□□ 0.86
MT-ND1P03886 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
MT-ND1P03886 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
MT-ND1P03886 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.45■□□□□ 0.86
MT-ND1P03886 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.45■□□□□ 0.86
MT-ND1P03886 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC20.45■□□□□ 0.86
MT-ND1P03886 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
MT-ND1P03886 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC20.45■□□□□ 0.86
MT-ND1P03886 SNX5-217ENST00000606557 1087 ntBASIC20.45■□□□□ 0.86
MT-ND1P03886 AC137630.3-201ENST00000607245 391 ntBASIC20.45■□□□□ 0.86
MT-ND1P03886 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC20.45■□□□□ 0.86
MT-ND1P03886 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
MT-ND1P03886 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
MT-ND1P03886 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.45■□□□□ 0.86
MT-ND1P03886 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
MT-ND1P03886 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
MT-ND1P03886 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
MT-ND1P03886 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
MT-ND1P03886 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
MT-ND1P03886 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
MT-ND1P03886 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.44■□□□□ 0.86
MT-ND1P03886 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.44■□□□□ 0.86
MT-ND1P03886 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.44■□□□□ 0.86
MT-ND1P03886 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
MT-ND1P03886 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
MT-ND1P03886 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.44■□□□□ 0.86
MT-ND1P03886 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
MT-ND1P03886 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.43■□□□□ 0.86
MT-ND1P03886 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
MT-ND1P03886 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
MT-ND1P03886 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
MT-ND1P03886 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
MT-ND1P03886 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.43■□□□□ 0.86
MT-ND1P03886 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
MT-ND1P03886 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
MT-ND1P03886 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
MT-ND1P03886 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.43■□□□□ 0.86
MT-ND1P03886 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.43■□□□□ 0.86
MT-ND1P03886 AL031848.2-201ENST00000607670 837 ntBASIC20.43■□□□□ 0.86
MT-ND1P03886 AF106564.1-201ENST00000607058 2553 ntBASIC20.43■□□□□ 0.86
MT-ND1P03886 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
MT-ND1P03886 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.43■□□□□ 0.86
MT-ND1P03886 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.43■□□□□ 0.86
MT-ND1P03886 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.43■□□□□ 0.86
MT-ND1P03886 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
MT-ND1P03886 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
MT-ND1P03886 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
MT-ND1P03886 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
MT-ND1P03886 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
MT-ND1P03886 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
MT-ND1P03886 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.42■□□□□ 0.86
MT-ND1P03886 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
MT-ND1P03886 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
MT-ND1P03886 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
MT-ND1P03886 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
MT-ND1P03886 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
MT-ND1P03886 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.42■□□□□ 0.86
MT-ND1P03886 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
MT-ND1P03886 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
MT-ND1P03886 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
MT-ND1P03886 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
MT-ND1P03886 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
MT-ND1P03886 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
MT-ND1P03886 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
MT-ND1P03886 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
MT-ND1P03886 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
MT-ND1P03886 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.41■□□□□ 0.86
MT-ND1P03886 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
MT-ND1P03886 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.41■□□□□ 0.86
MT-ND1P03886 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
MT-ND1P03886 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
MT-ND1P03886 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
MT-ND1P03886 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.41■□□□□ 0.86
MT-ND1P03886 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.41■□□□□ 0.86
MT-ND1P03886 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
MT-ND1P03886 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
MT-ND1P03886 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
MT-ND1P03886 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.41■□□□□ 0.86
MT-ND1P03886 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
MT-ND1P03886 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
MT-ND1P03886 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
MT-ND1P03886 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
MT-ND1P03886 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
MT-ND1P03886 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
MT-ND1P03886 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
MT-ND1P03886 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.4■□□□□ 0.86
MT-ND1P03886 LINC01529-204ENST00000636474 1715 ntBASIC20.4■□□□□ 0.86
MT-ND1P03886 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
MT-ND1P03886 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
MT-ND1P03886 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
MT-ND1P03886 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
MT-ND1P03886 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
MT-ND1P03886 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
MT-ND1P03886 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
MT-ND1P03886 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
MT-ND1P03886 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
MT-ND1P03886 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
MT-ND1P03886 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.39■□□□□ 0.86
MT-ND1P03886 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.39■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms