Protein–RNA interactions for Protein: P01374

LTA, Lymphotoxin-alpha, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTAP01374 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LTAP01374 LINC01521-201ENST00000504184 1943 ntBASIC16.37■□□□□ 0.21
LTAP01374 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LTAP01374 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
LTAP01374 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC16.37■□□□□ 0.21
LTAP01374 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LTAP01374 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LTAP01374 ABHD17AP3-201ENST00000503096 1137 ntBASIC16.37■□□□□ 0.21
LTAP01374 U85056.1-201ENST00000616429 682 ntBASIC16.37■□□□□ 0.21
LTAP01374 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC16.37■□□□□ 0.21
LTAP01374 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC16.37■□□□□ 0.21
LTAP01374 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LTAP01374 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
LTAP01374 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LTAP01374 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LTAP01374 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LTAP01374 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
LTAP01374 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LTAP01374 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LTAP01374 ME2-206ENST00000638410 2289 ntTSL 5 BASIC16.36■□□□□ 0.21
LTAP01374 ME2-210ENST00000639255 2262 ntTSL 5 BASIC16.36■□□□□ 0.21
LTAP01374 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC16.36■□□□□ 0.21
LTAP01374 AL121603.2-201ENST00000557373 2117 ntBASIC16.36■□□□□ 0.21
LTAP01374 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC16.36■□□□□ 0.21
LTAP01374 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LTAP01374 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
LTAP01374 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LTAP01374 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LTAP01374 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC16.36■□□□□ 0.21
LTAP01374 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC16.36■□□□□ 0.21
LTAP01374 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
LTAP01374 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LTAP01374 SNX5-217ENST00000606557 1087 ntBASIC16.36■□□□□ 0.21
LTAP01374 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC16.36■□□□□ 0.21
LTAP01374 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC16.36■□□□□ 0.21
LTAP01374 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LTAP01374 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
LTAP01374 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LTAP01374 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC16.35■□□□□ 0.21
LTAP01374 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
LTAP01374 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
LTAP01374 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LTAP01374 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LTAP01374 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LTAP01374 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LTAP01374 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC16.35■□□□□ 0.21
LTAP01374 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LTAP01374 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LTAP01374 IDNK-201ENST00000376417 511 ntTSL 5 BASIC16.35■□□□□ 0.21
LTAP01374 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LTAP01374 DUX4L4-201ENST00000566884 1269 ntBASIC16.35■□□□□ 0.21
LTAP01374 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LTAP01374 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC16.35■□□□□ 0.21
LTAP01374 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LTAP01374 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC16.35■□□□□ 0.21
LTAP01374 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC16.35■□□□□ 0.21
LTAP01374 AF106564.1-201ENST00000607058 2553 ntBASIC16.34■□□□□ 0.21
LTAP01374 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LTAP01374 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC16.34■□□□□ 0.21
LTAP01374 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LTAP01374 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LTAP01374 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC16.34■□□□□ 0.21
LTAP01374 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC16.34■□□□□ 0.21
LTAP01374 KRT18P60-201ENST00000312876 1297 ntBASIC16.34■□□□□ 0.21
LTAP01374 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
LTAP01374 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
LTAP01374 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC16.34■□□□□ 0.21
LTAP01374 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC16.34■□□□□ 0.21
LTAP01374 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LTAP01374 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LTAP01374 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
LTAP01374 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC16.34■□□□□ 0.21
LTAP01374 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
LTAP01374 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC16.34■□□□□ 0.21
LTAP01374 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
LTAP01374 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
LTAP01374 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
LTAP01374 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
LTAP01374 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
LTAP01374 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
LTAP01374 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
LTAP01374 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC16.33■□□□□ 0.21
LTAP01374 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC16.33■□□□□ 0.21
LTAP01374 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
LTAP01374 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
LTAP01374 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC16.33■□□□□ 0.21
LTAP01374 AL157384.1-201ENST00000445995 2473 ntBASIC16.33■□□□□ 0.2
LTAP01374 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LTAP01374 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC16.33■□□□□ 0.2
LTAP01374 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC16.33■□□□□ 0.2
LTAP01374 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC16.33■□□□□ 0.2
LTAP01374 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
LTAP01374 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
LTAP01374 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC16.33■□□□□ 0.2
LTAP01374 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LTAP01374 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LTAP01374 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LTAP01374 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LTAP01374 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
LTAP01374 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms