Protein–RNA interactions for Protein: P00558

PGK1, Phosphoglycerate kinase 1, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1P00558 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC24.42■■□□□ 1.5
PGK1P00558 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
PGK1P00558 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
PGK1P00558 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC24.42■■□□□ 1.5
PGK1P00558 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
PGK1P00558 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC24.42■■□□□ 1.5
PGK1P00558 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
PGK1P00558 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC24.42■■□□□ 1.5
PGK1P00558 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC24.41■■□□□ 1.5
PGK1P00558 LINC01124-201ENST00000409786 2117 ntBASIC24.41■■□□□ 1.5
PGK1P00558 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC24.41■■□□□ 1.5
PGK1P00558 KRT87P-202ENST00000534226 1464 ntBASIC24.41■■□□□ 1.5
PGK1P00558 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
PGK1P00558 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC24.41■■□□□ 1.5
PGK1P00558 DUX4L16-201ENST00000555130 1264 ntBASIC24.41■■□□□ 1.5
PGK1P00558 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC24.41■■□□□ 1.5
PGK1P00558 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
PGK1P00558 LINC00543-201ENST00000567234 1845 ntBASIC24.4■■□□□ 1.5
PGK1P00558 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC24.4■■□□□ 1.5
PGK1P00558 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
PGK1P00558 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
PGK1P00558 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC24.4■■□□□ 1.5
PGK1P00558 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
PGK1P00558 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC24.4■■□□□ 1.5
PGK1P00558 UBE2DNL-204ENST00000602536 740 ntBASIC24.4■■□□□ 1.5
PGK1P00558 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
PGK1P00558 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC24.4■■□□□ 1.5
PGK1P00558 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
PGK1P00558 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
PGK1P00558 PARP1-202ENST00000366792 553 ntTSL 3 BASIC24.39■■□□□ 1.49
PGK1P00558 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
PGK1P00558 GUSBP6-202ENST00000438529 1198 ntBASIC24.39■■□□□ 1.49
PGK1P00558 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC24.39■■□□□ 1.49
PGK1P00558 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC24.39■■□□□ 1.49
PGK1P00558 AC231657.2-201ENST00000624556 255 ntBASIC24.39■■□□□ 1.49
PGK1P00558 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC24.39■■□□□ 1.49
PGK1P00558 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC24.39■■□□□ 1.49
PGK1P00558 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PGK1P00558 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC24.38■■□□□ 1.49
PGK1P00558 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC24.38■■□□□ 1.49
PGK1P00558 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC24.38■■□□□ 1.49
PGK1P00558 AC007322.1-201ENST00000426983 750 ntBASIC24.38■■□□□ 1.49
PGK1P00558 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
PGK1P00558 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PGK1P00558 SLC7A5P2-201ENST00000553010 536 ntBASIC24.38■■□□□ 1.49
PGK1P00558 KLF13-207ENST00000560473 489 ntTSL 3 BASIC24.38■■□□□ 1.49
PGK1P00558 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC24.38■■□□□ 1.49
PGK1P00558 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
PGK1P00558 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
PGK1P00558 AC005181.1-201ENST00000604782 1256 ntBASIC24.38■■□□□ 1.49
PGK1P00558 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC24.38■■□□□ 1.49
PGK1P00558 AC066615.1-201ENST00000640911 628 ntBASIC24.38■■□□□ 1.49
PGK1P00558 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC24.38■■□□□ 1.49
PGK1P00558 PXK-203ENST00000383715 1756 ntTSL 5 BASIC24.38■■□□□ 1.49
PGK1P00558 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
PGK1P00558 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
PGK1P00558 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC24.38■■□□□ 1.49
PGK1P00558 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
PGK1P00558 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
PGK1P00558 AC020928.2-201ENST00000588717 2197 ntBASIC24.37■■□□□ 1.49
PGK1P00558 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
PGK1P00558 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC24.37■■□□□ 1.49
PGK1P00558 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
PGK1P00558 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC24.37■■□□□ 1.49
PGK1P00558 METTL15-202ENST00000403099 795 ntTSL 5 BASIC24.37■■□□□ 1.49
PGK1P00558 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC24.37■■□□□ 1.49
PGK1P00558 AL138781.1-201ENST00000566567 1274 ntBASIC24.37■■□□□ 1.49
PGK1P00558 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC24.37■■□□□ 1.49
PGK1P00558 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC24.37■■□□□ 1.49
PGK1P00558 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC24.37■■□□□ 1.49
PGK1P00558 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC24.37■■□□□ 1.49
PGK1P00558 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
PGK1P00558 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC24.36■■□□□ 1.49
PGK1P00558 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC24.36■■□□□ 1.49
PGK1P00558 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC24.36■■□□□ 1.49
PGK1P00558 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC24.36■■□□□ 1.49
PGK1P00558 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
PGK1P00558 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC24.36■■□□□ 1.49
PGK1P00558 KRT18P6-201ENST00000555540 1265 ntBASIC24.36■■□□□ 1.49
PGK1P00558 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC24.36■■□□□ 1.49
PGK1P00558 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC24.36■■□□□ 1.49
PGK1P00558 TFG-210ENST00000620299 1289 ntTSL 5 BASIC24.36■■□□□ 1.49
PGK1P00558 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
PGK1P00558 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
PGK1P00558 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC24.36■■□□□ 1.49
PGK1P00558 DUSP8P3-201ENST00000399571 1760 ntBASIC24.36■■□□□ 1.49
PGK1P00558 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
PGK1P00558 ABCB10P4-201ENST00000566803 2184 ntBASIC24.35■■□□□ 1.49
PGK1P00558 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PGK1P00558 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PGK1P00558 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC24.35■■□□□ 1.49
PGK1P00558 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PGK1P00558 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC24.35■■□□□ 1.49
PGK1P00558 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC24.35■■□□□ 1.49
PGK1P00558 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
PGK1P00558 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PGK1P00558 AC009237.3-201ENST00000393279 1427 ntBASIC24.35■■□□□ 1.49
PGK1P00558 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC24.35■■□□□ 1.49
PGK1P00558 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
PGK1P00558 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms