Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SIX6O95475 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SIX6O95475 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC18.17■□□□□ 0.5
SIX6O95475 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SIX6O95475 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SIX6O95475 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.17■□□□□ 0.5
SIX6O95475 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SIX6O95475 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC18.17■□□□□ 0.5
SIX6O95475 SSSCA1-AS1-201ENST00000567594 614 ntBASIC18.17■□□□□ 0.5
SIX6O95475 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
SIX6O95475 METRNL-202ENST00000570778 967 ntTSL 5 BASIC18.17■□□□□ 0.5
SIX6O95475 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SIX6O95475 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SIX6O95475 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SIX6O95475 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.17■□□□□ 0.5
SIX6O95475 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SIX6O95475 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SIX6O95475 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC18.17■□□□□ 0.5
SIX6O95475 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SIX6O95475 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SIX6O95475 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SIX6O95475 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
SIX6O95475 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.17■□□□□ 0.5
SIX6O95475 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
SIX6O95475 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
SIX6O95475 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SIX6O95475 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SIX6O95475 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
SIX6O95475 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SIX6O95475 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
SIX6O95475 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC18.16■□□□□ 0.5
SIX6O95475 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC18.16■□□□□ 0.5
SIX6O95475 STK32C-205ENST00000456004 607 ntTSL 2 BASIC18.16■□□□□ 0.5
SIX6O95475 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
SIX6O95475 AC026202.3-201ENST00000600805 1127 ntBASIC18.16■□□□□ 0.5
SIX6O95475 RAP2CP1-202ENST00000605179 643 ntBASIC18.16■□□□□ 0.5
SIX6O95475 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SIX6O95475 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.16■□□□□ 0.5
SIX6O95475 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SIX6O95475 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.16■□□□□ 0.5
SIX6O95475 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SIX6O95475 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.16■□□□□ 0.5
SIX6O95475 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
SIX6O95475 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SIX6O95475 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
SIX6O95475 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
SIX6O95475 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.15■□□□□ 0.5
SIX6O95475 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC18.15■□□□□ 0.5
SIX6O95475 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
SIX6O95475 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC18.15■□□□□ 0.5
SIX6O95475 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SIX6O95475 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SIX6O95475 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SIX6O95475 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
SIX6O95475 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SIX6O95475 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
SIX6O95475 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
SIX6O95475 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
SIX6O95475 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC18.15■□□□□ 0.5
SIX6O95475 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
SIX6O95475 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.14■□□□□ 0.5
SIX6O95475 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SIX6O95475 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.14■□□□□ 0.49
SIX6O95475 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC18.14■□□□□ 0.49
SIX6O95475 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SIX6O95475 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SIX6O95475 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SIX6O95475 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SIX6O95475 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
SIX6O95475 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SIX6O95475 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC18.14■□□□□ 0.49
SIX6O95475 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.14■□□□□ 0.49
SIX6O95475 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
SIX6O95475 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SIX6O95475 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SIX6O95475 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SIX6O95475 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SIX6O95475 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SIX6O95475 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC18.13■□□□□ 0.49
SIX6O95475 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SIX6O95475 ECEL1P2-201ENST00000461596 1295 ntBASIC18.13■□□□□ 0.49
SIX6O95475 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SIX6O95475 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
SIX6O95475 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.13■□□□□ 0.49
SIX6O95475 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
SIX6O95475 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SIX6O95475 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.13■□□□□ 0.49
SIX6O95475 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
SIX6O95475 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SIX6O95475 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SIX6O95475 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
SIX6O95475 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SIX6O95475 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.12■□□□□ 0.49
SIX6O95475 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
SIX6O95475 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC18.12■□□□□ 0.49
SIX6O95475 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SIX6O95475 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SIX6O95475 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SIX6O95475 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SIX6O95475 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms