Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
SNX4O95219 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SNX4O95219 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SNX4O95219 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SNX4O95219 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SNX4O95219 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.31■□□□□ 0.84
SNX4O95219 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.31■□□□□ 0.84
SNX4O95219 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SNX4O95219 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SNX4O95219 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SNX4O95219 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SNX4O95219 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.31■□□□□ 0.84
SNX4O95219 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.31■□□□□ 0.84
SNX4O95219 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SNX4O95219 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SNX4O95219 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SNX4O95219 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.31■□□□□ 0.84
SNX4O95219 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
SNX4O95219 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SNX4O95219 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SNX4O95219 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
SNX4O95219 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
SNX4O95219 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.3■□□□□ 0.84
SNX4O95219 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SNX4O95219 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SNX4O95219 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.3■□□□□ 0.84
SNX4O95219 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.3■□□□□ 0.84
SNX4O95219 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SNX4O95219 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SNX4O95219 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
SNX4O95219 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
SNX4O95219 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
SNX4O95219 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
SNX4O95219 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SNX4O95219 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
SNX4O95219 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SNX4O95219 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SNX4O95219 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.29■□□□□ 0.84
SNX4O95219 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SNX4O95219 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SNX4O95219 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
SNX4O95219 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.29■□□□□ 0.84
SNX4O95219 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SNX4O95219 MIR939-201ENST00000401314 82 ntBASIC20.29■□□□□ 0.84
SNX4O95219 BX842568.3-201ENST00000418104 571 ntBASIC20.29■□□□□ 0.84
SNX4O95219 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.29■□□□□ 0.84
SNX4O95219 AC091305.1-201ENST00000479476 895 ntBASIC20.29■□□□□ 0.84
SNX4O95219 AP001330.3-201ENST00000520123 633 ntBASIC20.29■□□□□ 0.84
SNX4O95219 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
SNX4O95219 AC027682.1-201ENST00000562846 899 ntBASIC20.29■□□□□ 0.84
SNX4O95219 AF213884.3-201ENST00000563833 479 ntBASIC20.29■□□□□ 0.84
SNX4O95219 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.29■□□□□ 0.84
SNX4O95219 AL136967.2-201ENST00000623968 743 ntBASIC20.29■□□□□ 0.84
SNX4O95219 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.29■□□□□ 0.84
SNX4O95219 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SNX4O95219 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
SNX4O95219 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SNX4O95219 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SNX4O95219 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SNX4O95219 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SNX4O95219 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
SNX4O95219 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SNX4O95219 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
SNX4O95219 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SNX4O95219 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
SNX4O95219 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SNX4O95219 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.28■□□□□ 0.84
SNX4O95219 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.28■□□□□ 0.84
SNX4O95219 AL353803.4-201ENST00000565882 1934 ntBASIC20.28■□□□□ 0.84
SNX4O95219 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SNX4O95219 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SNX4O95219 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SNX4O95219 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
SNX4O95219 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SNX4O95219 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.28■□□□□ 0.84
SNX4O95219 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.28■□□□□ 0.84
SNX4O95219 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SNX4O95219 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SNX4O95219 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SNX4O95219 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SNX4O95219 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.28■□□□□ 0.84
SNX4O95219 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SNX4O95219 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SNX4O95219 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
SNX4O95219 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SNX4O95219 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SNX4O95219 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SNX4O95219 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SNX4O95219 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.27■□□□□ 0.84
SNX4O95219 AC233992.3-201ENST00000607491 485 ntBASIC20.27■□□□□ 0.84
SNX4O95219 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
SNX4O95219 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
SNX4O95219 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.27■□□□□ 0.84
SNX4O95219 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
SNX4O95219 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
SNX4O95219 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
SNX4O95219 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
SNX4O95219 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.27■□□□□ 0.83
SNX4O95219 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SNX4O95219 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms