Protein–RNA interactions for Protein: O94911

ABCA8, ATP-binding cassette sub-family A member 8, humanhuman

Predictions only

Length 1,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA8O94911 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC34.43■■■■□ 3.1
ABCA8O94911 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC34.43■■■■□ 3.1
ABCA8O94911 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC34.43■■■■□ 3.1
ABCA8O94911 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC34.43■■■■□ 3.1
ABCA8O94911 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC34.42■■■■□ 3.1
ABCA8O94911 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC34.42■■■■□ 3.1
ABCA8O94911 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC34.42■■■■□ 3.1
ABCA8O94911 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC34.42■■■■□ 3.1
ABCA8O94911 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC34.42■■■■□ 3.1
ABCA8O94911 AC133552.2-202ENST00000575694 574 ntBASIC34.42■■■■□ 3.1
ABCA8O94911 USP45-205ENST00000472914 1617 ntTSL 5 BASIC34.42■■■■□ 3.1
ABCA8O94911 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC34.42■■■■□ 3.1
ABCA8O94911 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC34.42■■■■□ 3.1
ABCA8O94911 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC34.42■■■■□ 3.1
ABCA8O94911 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC34.42■■■■□ 3.1
ABCA8O94911 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC34.41■■■■□ 3.1
ABCA8O94911 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC34.41■■■■□ 3.1
ABCA8O94911 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC34.41■■■■□ 3.1
ABCA8O94911 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC34.41■■■■□ 3.1
ABCA8O94911 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC34.41■■■■□ 3.1
ABCA8O94911 AC008687.6-201ENST00000596318 630 ntBASIC34.41■■■■□ 3.1
ABCA8O94911 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC34.41■■■■□ 3.1
ABCA8O94911 AC009237.3-201ENST00000393279 1427 ntBASIC34.41■■■■□ 3.1
ABCA8O94911 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC34.41■■■■□ 3.1
ABCA8O94911 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC34.4■■■■□ 3.1
ABCA8O94911 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC34.4■■■■□ 3.1
ABCA8O94911 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC34.4■■■■□ 3.1
ABCA8O94911 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC34.4■■■■□ 3.1
ABCA8O94911 PFKL-212ENST00000628044 129 ntTSL 3 BASIC34.4■■■■□ 3.1
ABCA8O94911 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC34.4■■■■□ 3.1
ABCA8O94911 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC34.4■■■■□ 3.1
ABCA8O94911 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC34.4■■■■□ 3.1
ABCA8O94911 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC34.39■■■■□ 3.1
ABCA8O94911 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC34.39■■■■□ 3.1
ABCA8O94911 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC34.39■■■■□ 3.1
ABCA8O94911 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC34.39■■■■□ 3.1
ABCA8O94911 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC34.39■■■■□ 3.1
ABCA8O94911 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC34.39■■■■□ 3.1
ABCA8O94911 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC34.38■■■■□ 3.09
ABCA8O94911 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC34.38■■■■□ 3.09
ABCA8O94911 AC010141.2-201ENST00000452426 721 ntBASIC34.38■■■■□ 3.09
ABCA8O94911 DET1-205ENST00000558413 583 ntTSL 4 BASIC34.38■■■■□ 3.09
ABCA8O94911 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC34.38■■■■□ 3.09
ABCA8O94911 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC34.38■■■■□ 3.09
ABCA8O94911 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC34.38■■■■□ 3.09
ABCA8O94911 DUSP8P3-201ENST00000399571 1760 ntBASIC34.38■■■■□ 3.09
ABCA8O94911 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC34.38■■■■□ 3.09
ABCA8O94911 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC34.38■■■■□ 3.09
ABCA8O94911 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC34.37■■■■□ 3.09
ABCA8O94911 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC34.37■■■■□ 3.09
ABCA8O94911 AF201337.1-201ENST00000520239 748 ntBASIC34.37■■■■□ 3.09
ABCA8O94911 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC34.37■■■■□ 3.09
ABCA8O94911 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC34.37■■■■□ 3.09
ABCA8O94911 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC34.37■■■■□ 3.09
ABCA8O94911 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC34.37■■■■□ 3.09
ABCA8O94911 PXK-203ENST00000383715 1756 ntTSL 5 BASIC34.37■■■■□ 3.09
ABCA8O94911 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC34.37■■■■□ 3.09
ABCA8O94911 H19-210ENST00000439725 1929 ntTSL 2 BASIC34.37■■■■□ 3.09
ABCA8O94911 AL353803.4-201ENST00000565882 1934 ntBASIC34.37■■■■□ 3.09
ABCA8O94911 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC34.37■■■■□ 3.09
ABCA8O94911 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC34.37■■■■□ 3.09
ABCA8O94911 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC34.36■■■■□ 3.09
ABCA8O94911 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC34.36■■■■□ 3.09
ABCA8O94911 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC34.36■■■■□ 3.09
ABCA8O94911 TBCB-214ENST00000629269 413 ntTSL 5 BASIC34.36■■■■□ 3.09
ABCA8O94911 MARS-234ENST00000630571 216 ntTSL 5 BASIC34.36■■■■□ 3.09
ABCA8O94911 MARS-235ENST00000630803 183 ntTSL 3 BASIC34.36■■■■□ 3.09
ABCA8O94911 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC34.36■■■■□ 3.09
ABCA8O94911 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC34.36■■■■□ 3.09
ABCA8O94911 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC34.36■■■■□ 3.09
ABCA8O94911 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC34.36■■■■□ 3.09
ABCA8O94911 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC34.36■■■■□ 3.09
ABCA8O94911 AP001160.3-201ENST00000601484 763 ntBASIC34.36■■■■□ 3.09
ABCA8O94911 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC34.36■■■■□ 3.09
ABCA8O94911 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC34.36■■■■□ 3.09
ABCA8O94911 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC34.35■■■■□ 3.09
ABCA8O94911 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC34.35■■■■□ 3.09
ABCA8O94911 AC055733.4-201ENST00000638462 1354 ntBASIC34.35■■■■□ 3.09
ABCA8O94911 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC34.35■■■■□ 3.09
ABCA8O94911 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC34.35■■■■□ 3.09
ABCA8O94911 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC34.35■■■■□ 3.09
ABCA8O94911 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC34.34■■■■□ 3.09
ABCA8O94911 CYP2T1P-201ENST00000432607 1285 ntBASIC34.34■■■■□ 3.09
ABCA8O94911 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC34.34■■■■□ 3.09
ABCA8O94911 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC34.34■■■■□ 3.09
ABCA8O94911 AC010536.3-201ENST00000620306 533 ntBASIC34.34■■■■□ 3.09
ABCA8O94911 AC133041.1-202ENST00000642053 222 ntBASIC34.34■■■■□ 3.09
ABCA8O94911 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC34.34■■■■□ 3.09
ABCA8O94911 LINC00543-201ENST00000567234 1845 ntBASIC34.34■■■■□ 3.09
ABCA8O94911 SERP1-208ENST00000491660 830 ntTSL 2 BASIC34.33■■■■□ 3.09
ABCA8O94911 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC34.33■■■■□ 3.09
ABCA8O94911 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC34.32■■■■□ 3.09
ABCA8O94911 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC34.32■■■■□ 3.09
ABCA8O94911 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC34.32■■■■□ 3.09
ABCA8O94911 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC34.32■■■■□ 3.09
ABCA8O94911 ITM2C-210ENST00000620962 501 ntBASIC34.32■■■■□ 3.09
ABCA8O94911 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC34.32■■■■□ 3.09
ABCA8O94911 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC34.32■■■■□ 3.09
ABCA8O94911 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC34.32■■■■□ 3.09
ABCA8O94911 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC34.32■■■■□ 3.08
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms