Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
HCN1O60741 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.24■□□□□ 0.83
HCN1O60741 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.24■□□□□ 0.83
HCN1O60741 BX842568.3-201ENST00000418104 571 ntBASIC20.24■□□□□ 0.83
HCN1O60741 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.24■□□□□ 0.83
HCN1O60741 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
HCN1O60741 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.24■□□□□ 0.83
HCN1O60741 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
HCN1O60741 AC008764.7-201ENST00000593779 1081 ntBASIC20.24■□□□□ 0.83
HCN1O60741 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.24■□□□□ 0.83
HCN1O60741 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.24■□□□□ 0.83
HCN1O60741 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
HCN1O60741 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
HCN1O60741 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.24■□□□□ 0.83
HCN1O60741 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
HCN1O60741 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HCN1O60741 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.23■□□□□ 0.83
HCN1O60741 AL353803.4-201ENST00000565882 1934 ntBASIC20.23■□□□□ 0.83
HCN1O60741 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HCN1O60741 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.23■□□□□ 0.83
HCN1O60741 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HCN1O60741 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HCN1O60741 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.23■□□□□ 0.83
HCN1O60741 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.23■□□□□ 0.83
HCN1O60741 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.23■□□□□ 0.83
HCN1O60741 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.23■□□□□ 0.83
HCN1O60741 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HCN1O60741 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC20.23■□□□□ 0.83
HCN1O60741 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC20.23■□□□□ 0.83
HCN1O60741 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.23■□□□□ 0.83
HCN1O60741 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.23■□□□□ 0.83
HCN1O60741 AC233992.3-201ENST00000607491 485 ntBASIC20.23■□□□□ 0.83
HCN1O60741 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HCN1O60741 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
HCN1O60741 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HCN1O60741 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HCN1O60741 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
HCN1O60741 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HCN1O60741 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HCN1O60741 ECEL1P1-201ENST00000373592 1742 ntBASIC20.22■□□□□ 0.83
HCN1O60741 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
HCN1O60741 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HCN1O60741 AC099791.1-201ENST00000416440 715 ntBASIC20.22■□□□□ 0.83
HCN1O60741 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.22■□□□□ 0.83
HCN1O60741 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.22■□□□□ 0.83
HCN1O60741 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
HCN1O60741 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
HCN1O60741 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.22■□□□□ 0.83
HCN1O60741 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
HCN1O60741 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HCN1O60741 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HCN1O60741 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
HCN1O60741 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
HCN1O60741 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HCN1O60741 LINC00526-201ENST00000581067 1875 ntBASIC20.22■□□□□ 0.83
HCN1O60741 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HCN1O60741 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
HCN1O60741 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.22■□□□□ 0.83
HCN1O60741 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.21■□□□□ 0.83
HCN1O60741 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HCN1O60741 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.21■□□□□ 0.83
HCN1O60741 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
HCN1O60741 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HCN1O60741 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HCN1O60741 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC20.21■□□□□ 0.83
HCN1O60741 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.21■□□□□ 0.83
HCN1O60741 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
HCN1O60741 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
HCN1O60741 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
HCN1O60741 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HCN1O60741 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HCN1O60741 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.21■□□□□ 0.83
HCN1O60741 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
HCN1O60741 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HCN1O60741 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.83
HCN1O60741 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HCN1O60741 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
HCN1O60741 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.2■□□□□ 0.82
HCN1O60741 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HCN1O60741 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.2■□□□□ 0.82
HCN1O60741 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.2■□□□□ 0.82
HCN1O60741 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
HCN1O60741 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.2■□□□□ 0.82
HCN1O60741 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.2■□□□□ 0.82
HCN1O60741 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
HCN1O60741 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.2■□□□□ 0.82
HCN1O60741 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.19■□□□□ 0.82
HCN1O60741 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
HCN1O60741 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
HCN1O60741 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.19■□□□□ 0.82
HCN1O60741 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.19■□□□□ 0.82
HCN1O60741 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.19■□□□□ 0.82
HCN1O60741 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
HCN1O60741 DUX4L4-201ENST00000566884 1269 ntBASIC20.19■□□□□ 0.82
HCN1O60741 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.19■□□□□ 0.82
HCN1O60741 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HCN1O60741 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
HCN1O60741 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HCN1O60741 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.19■□□□□ 0.82
HCN1O60741 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms