Protein–RNA interactions for Protein: O60293

ZFC3H1, Zinc finger C3H1 domain-containing protein, humanhuman

Known RBP Predictions only

Length 1,989 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFC3H1O60293 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
ZFC3H1O60293 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC21.57■■□□□ 1.04
ZFC3H1O60293 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
ZFC3H1O60293 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
ZFC3H1O60293 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.57■■□□□ 1.04
ZFC3H1O60293 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.57■■□□□ 1.04
ZFC3H1O60293 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ZFC3H1O60293 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ZFC3H1O60293 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ZFC3H1O60293 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ZFC3H1O60293 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ZFC3H1O60293 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC21.57■■□□□ 1.04
ZFC3H1O60293 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC21.57■■□□□ 1.04
ZFC3H1O60293 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ZFC3H1O60293 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC21.57■■□□□ 1.04
ZFC3H1O60293 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
ZFC3H1O60293 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ZFC3H1O60293 C1orf229-201ENST00000623686 2258 ntBASIC21.56■■□□□ 1.04
ZFC3H1O60293 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ZFC3H1O60293 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC21.56■■□□□ 1.04
ZFC3H1O60293 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.04
ZFC3H1O60293 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.56■■□□□ 1.04
ZFC3H1O60293 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
ZFC3H1O60293 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ZFC3H1O60293 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
ZFC3H1O60293 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ZFC3H1O60293 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
ZFC3H1O60293 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ZFC3H1O60293 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC21.55■■□□□ 1.04
ZFC3H1O60293 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ZFC3H1O60293 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
ZFC3H1O60293 NT5C3AP1-201ENST00000394500 1012 ntBASIC21.55■■□□□ 1.04
ZFC3H1O60293 AL358852.1-201ENST00000623174 1268 ntBASIC21.55■■□□□ 1.04
ZFC3H1O60293 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ZFC3H1O60293 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
ZFC3H1O60293 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.55■■□□□ 1.04
ZFC3H1O60293 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.55■■□□□ 1.04
ZFC3H1O60293 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.55■■□□□ 1.04
ZFC3H1O60293 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ZFC3H1O60293 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ZFC3H1O60293 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ZFC3H1O60293 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
ZFC3H1O60293 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC21.54■■□□□ 1.04
ZFC3H1O60293 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
ZFC3H1O60293 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ZFC3H1O60293 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ZFC3H1O60293 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ZFC3H1O60293 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
ZFC3H1O60293 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC21.54■■□□□ 1.04
ZFC3H1O60293 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
ZFC3H1O60293 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ZFC3H1O60293 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
ZFC3H1O60293 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ZFC3H1O60293 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
ZFC3H1O60293 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.53■■□□□ 1.04
ZFC3H1O60293 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ZFC3H1O60293 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ZFC3H1O60293 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.52■■□□□ 1.04
ZFC3H1O60293 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC21.52■■□□□ 1.04
ZFC3H1O60293 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC21.52■■□□□ 1.04
ZFC3H1O60293 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
ZFC3H1O60293 AL031602.1-201ENST00000633169 911 ntBASIC21.52■■□□□ 1.04
ZFC3H1O60293 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
ZFC3H1O60293 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ZFC3H1O60293 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ZFC3H1O60293 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
ZFC3H1O60293 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ZFC3H1O60293 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC21.52■■□□□ 1.04
ZFC3H1O60293 KRT18P14-201ENST00000534205 1250 ntBASIC21.52■■□□□ 1.04
ZFC3H1O60293 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ZFC3H1O60293 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ZFC3H1O60293 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
ZFC3H1O60293 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC21.51■■□□□ 1.03
ZFC3H1O60293 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
ZFC3H1O60293 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC21.51■■□□□ 1.03
ZFC3H1O60293 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.51■■□□□ 1.03
ZFC3H1O60293 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ZFC3H1O60293 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
ZFC3H1O60293 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
ZFC3H1O60293 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.51■■□□□ 1.03
ZFC3H1O60293 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
ZFC3H1O60293 MIR6821-201ENST00000617625 74 ntBASIC21.51■■□□□ 1.03
ZFC3H1O60293 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ZFC3H1O60293 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ZFC3H1O60293 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
ZFC3H1O60293 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ZFC3H1O60293 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
ZFC3H1O60293 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
ZFC3H1O60293 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC21.5■■□□□ 1.03
ZFC3H1O60293 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
ZFC3H1O60293 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
ZFC3H1O60293 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
ZFC3H1O60293 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
ZFC3H1O60293 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.5■■□□□ 1.03
ZFC3H1O60293 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
ZFC3H1O60293 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ZFC3H1O60293 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.5■■□□□ 1.03
ZFC3H1O60293 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.5■■□□□ 1.03
ZFC3H1O60293 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
ZFC3H1O60293 AL354811.1-201ENST00000610286 706 ntBASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms