Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 UBE2DNL-204ENST00000602536 740 ntBASIC20.58■□□□□ 0.88
URB1O60287 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.58■□□□□ 0.88
URB1O60287 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
URB1O60287 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
URB1O60287 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
URB1O60287 AP006294.2-201ENST00000641667 209 ntBASIC20.57■□□□□ 0.88
URB1O60287 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
URB1O60287 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
URB1O60287 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
URB1O60287 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.57■□□□□ 0.88
URB1O60287 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
URB1O60287 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.57■□□□□ 0.88
URB1O60287 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC20.57■□□□□ 0.88
URB1O60287 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
URB1O60287 DUSP5P2-201ENST00000426873 1033 ntBASIC20.56■□□□□ 0.88
URB1O60287 AC079140.4-201ENST00000507448 529 ntBASIC20.56■□□□□ 0.88
URB1O60287 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
URB1O60287 MYCNOS-205ENST00000641950 531 ntBASIC20.56■□□□□ 0.88
URB1O60287 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.56■□□□□ 0.88
URB1O60287 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
URB1O60287 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
URB1O60287 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.56■□□□□ 0.88
URB1O60287 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
URB1O60287 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.56■□□□□ 0.88
URB1O60287 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
URB1O60287 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC20.56■□□□□ 0.88
URB1O60287 AC144652.1-201ENST00000609974 1624 ntBASIC20.56■□□□□ 0.88
URB1O60287 AL596275.1-201ENST00000423464 877 ntBASIC20.56■□□□□ 0.88
URB1O60287 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC20.56■□□□□ 0.88
URB1O60287 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
URB1O60287 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.56■□□□□ 0.88
URB1O60287 HLA-L-211ENST00000482052 1765 ntBASIC20.56■□□□□ 0.88
URB1O60287 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
URB1O60287 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
URB1O60287 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
URB1O60287 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.55■□□□□ 0.88
URB1O60287 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
URB1O60287 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
URB1O60287 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
URB1O60287 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.55■□□□□ 0.88
URB1O60287 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
URB1O60287 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.55■□□□□ 0.88
URB1O60287 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC20.55■□□□□ 0.88
URB1O60287 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC20.55■□□□□ 0.88
URB1O60287 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC20.54■□□□□ 0.88
URB1O60287 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
URB1O60287 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
URB1O60287 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
URB1O60287 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
URB1O60287 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
URB1O60287 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
URB1O60287 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
URB1O60287 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.53■□□□□ 0.88
URB1O60287 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.53■□□□□ 0.88
URB1O60287 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
URB1O60287 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
URB1O60287 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC20.53■□□□□ 0.88
URB1O60287 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.53■□□□□ 0.88
URB1O60287 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
URB1O60287 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.53■□□□□ 0.88
URB1O60287 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
URB1O60287 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
URB1O60287 MIR4758-201ENST00000577688 71 ntBASIC20.53■□□□□ 0.88
URB1O60287 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.53■□□□□ 0.88
URB1O60287 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
URB1O60287 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
URB1O60287 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
URB1O60287 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
URB1O60287 KRT87P-202ENST00000534226 1464 ntBASIC20.53■□□□□ 0.88
URB1O60287 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
URB1O60287 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
URB1O60287 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
URB1O60287 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
URB1O60287 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.52■□□□□ 0.88
URB1O60287 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC20.52■□□□□ 0.88
URB1O60287 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.52■□□□□ 0.88
URB1O60287 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
URB1O60287 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
URB1O60287 DUSP8P4-201ENST00000399538 1761 ntBASIC20.52■□□□□ 0.88
URB1O60287 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
URB1O60287 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC20.52■□□□□ 0.88
URB1O60287 IRX5-204ENST00000560154 879 ntTSL 5 BASIC20.52■□□□□ 0.88
URB1O60287 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
URB1O60287 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
URB1O60287 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
URB1O60287 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
URB1O60287 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
URB1O60287 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
URB1O60287 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
URB1O60287 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
URB1O60287 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
URB1O60287 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
URB1O60287 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.51■□□□□ 0.87
URB1O60287 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.51■□□□□ 0.87
URB1O60287 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
URB1O60287 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
URB1O60287 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
URB1O60287 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
URB1O60287 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
URB1O60287 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms