Protein–RNA interactions for Protein: O15446

CD3EAP, DNA-directed RNA polymerase I subunit RPA34, humanhuman

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD3EAPO15446 LINC00565-201ENST00000562710 2331 ntBASIC21.72■■□□□ 1.07
CD3EAPO15446 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CD3EAPO15446 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CD3EAPO15446 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CD3EAPO15446 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CD3EAPO15446 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CD3EAPO15446 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CD3EAPO15446 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CD3EAPO15446 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC21.71■■□□□ 1.07
CD3EAPO15446 AC068587.7-201ENST00000641602 218 ntBASIC21.71■■□□□ 1.07
CD3EAPO15446 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.71■■□□□ 1.07
CD3EAPO15446 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
CD3EAPO15446 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CD3EAPO15446 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CD3EAPO15446 AC008406.3-201ENST00000620001 1374 ntBASIC21.71■■□□□ 1.07
CD3EAPO15446 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC21.71■■□□□ 1.07
CD3EAPO15446 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CD3EAPO15446 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
CD3EAPO15446 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.7■■□□□ 1.06
CD3EAPO15446 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CD3EAPO15446 RBM38-205ENST00000440234 686 ntTSL 2 BASIC21.7■■□□□ 1.06
CD3EAPO15446 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CD3EAPO15446 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CD3EAPO15446 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC21.7■■□□□ 1.06
CD3EAPO15446 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC21.7■■□□□ 1.06
CD3EAPO15446 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC21.7■■□□□ 1.06
CD3EAPO15446 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CD3EAPO15446 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CD3EAPO15446 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CD3EAPO15446 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CD3EAPO15446 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.69■■□□□ 1.06
CD3EAPO15446 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CD3EAPO15446 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
CD3EAPO15446 UNC93B3-201ENST00000308076 687 ntBASIC21.69■■□□□ 1.06
CD3EAPO15446 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
CD3EAPO15446 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CD3EAPO15446 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CD3EAPO15446 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CD3EAPO15446 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
CD3EAPO15446 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC21.69■■□□□ 1.06
CD3EAPO15446 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CD3EAPO15446 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CD3EAPO15446 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CD3EAPO15446 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CD3EAPO15446 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
CD3EAPO15446 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
CD3EAPO15446 C11orf96-202ENST00000528572 1834 ntBASIC21.69■■□□□ 1.06
CD3EAPO15446 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
CD3EAPO15446 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CD3EAPO15446 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CD3EAPO15446 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
CD3EAPO15446 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CD3EAPO15446 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CD3EAPO15446 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CD3EAPO15446 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC21.68■■□□□ 1.06
CD3EAPO15446 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC21.68■■□□□ 1.06
CD3EAPO15446 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CD3EAPO15446 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC21.68■■□□□ 1.06
CD3EAPO15446 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CD3EAPO15446 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CD3EAPO15446 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.68■■□□□ 1.06
CD3EAPO15446 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CD3EAPO15446 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
CD3EAPO15446 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.68■■□□□ 1.06
CD3EAPO15446 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.67■■□□□ 1.06
CD3EAPO15446 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
CD3EAPO15446 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CD3EAPO15446 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CD3EAPO15446 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CD3EAPO15446 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CD3EAPO15446 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CD3EAPO15446 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CD3EAPO15446 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
CD3EAPO15446 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CD3EAPO15446 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
CD3EAPO15446 PTMA-205ENST00000410064 814 ntTSL 2 BASIC21.67■■□□□ 1.06
CD3EAPO15446 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC21.67■■□□□ 1.06
CD3EAPO15446 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC21.67■■□□□ 1.06
CD3EAPO15446 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CD3EAPO15446 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CD3EAPO15446 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CD3EAPO15446 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
CD3EAPO15446 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CD3EAPO15446 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
CD3EAPO15446 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CD3EAPO15446 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC21.66■■□□□ 1.06
CD3EAPO15446 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
CD3EAPO15446 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CD3EAPO15446 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CD3EAPO15446 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CD3EAPO15446 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CD3EAPO15446 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CD3EAPO15446 PEMT-206ENST00000435340 960 ntTSL 5 BASIC21.66■■□□□ 1.06
CD3EAPO15446 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CD3EAPO15446 AC079089.2-201ENST00000531211 1277 ntBASIC21.66■■□□□ 1.06
CD3EAPO15446 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC21.66■■□□□ 1.06
CD3EAPO15446 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CD3EAPO15446 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.65■■□□□ 1.06
CD3EAPO15446 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
CD3EAPO15446 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms