Protein–RNA interactions for Protein: O15321

TM9SF1, Transmembrane 9 superfamily member 1, humanhuman

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1O15321 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
TM9SF1O15321 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TM9SF1O15321 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC21.61■■□□□ 1.05
TM9SF1O15321 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TM9SF1O15321 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TM9SF1O15321 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TM9SF1O15321 AC004687.1-201ENST00000579003 1625 ntBASIC21.6■■□□□ 1.05
TM9SF1O15321 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TM9SF1O15321 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TM9SF1O15321 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TM9SF1O15321 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
TM9SF1O15321 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TM9SF1O15321 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
TM9SF1O15321 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.59■■□□□ 1.05
TM9SF1O15321 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.59■■□□□ 1.05
TM9SF1O15321 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TM9SF1O15321 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TM9SF1O15321 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
TM9SF1O15321 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TM9SF1O15321 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TM9SF1O15321 MIR6722-201ENST00000617286 78 ntBASIC21.59■■□□□ 1.05
TM9SF1O15321 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC21.59■■□□□ 1.05
TM9SF1O15321 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TM9SF1O15321 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21.59■■□□□ 1.05
TM9SF1O15321 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21.59■■□□□ 1.05
TM9SF1O15321 FEM1AP4-201ENST00000443167 1987 ntBASIC21.59■■□□□ 1.05
TM9SF1O15321 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.59■■□□□ 1.05
TM9SF1O15321 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC21.59■■□□□ 1.05
TM9SF1O15321 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TM9SF1O15321 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
TM9SF1O15321 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC21.58■■□□□ 1.05
TM9SF1O15321 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
TM9SF1O15321 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
TM9SF1O15321 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
TM9SF1O15321 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC21.58■■□□□ 1.05
TM9SF1O15321 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TM9SF1O15321 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TM9SF1O15321 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
TM9SF1O15321 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
TM9SF1O15321 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
TM9SF1O15321 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC21.58■■□□□ 1.05
TM9SF1O15321 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC21.58■■□□□ 1.05
TM9SF1O15321 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
TM9SF1O15321 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
TM9SF1O15321 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
TM9SF1O15321 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
TM9SF1O15321 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.57■■□□□ 1.04
TM9SF1O15321 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.57■■□□□ 1.04
TM9SF1O15321 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TM9SF1O15321 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
TM9SF1O15321 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TM9SF1O15321 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TM9SF1O15321 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TM9SF1O15321 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
TM9SF1O15321 NTF6A-201ENST00000591175 560 ntBASIC21.57■■□□□ 1.04
TM9SF1O15321 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TM9SF1O15321 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TM9SF1O15321 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC21.57■■□□□ 1.04
TM9SF1O15321 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
TM9SF1O15321 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC21.56■■□□□ 1.04
TM9SF1O15321 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TM9SF1O15321 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TM9SF1O15321 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC21.56■■□□□ 1.04
TM9SF1O15321 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
TM9SF1O15321 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
TM9SF1O15321 MIR4508-201ENST00000584178 70 ntBASIC21.56■■□□□ 1.04
TM9SF1O15321 AC010980.1-201ENST00000587192 1142 ntBASIC21.56■■□□□ 1.04
TM9SF1O15321 HSD17B1P1-201ENST00000590052 955 ntBASIC21.56■■□□□ 1.04
TM9SF1O15321 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
TM9SF1O15321 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TM9SF1O15321 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
TM9SF1O15321 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
TM9SF1O15321 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
TM9SF1O15321 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.56■■□□□ 1.04
TM9SF1O15321 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TM9SF1O15321 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TM9SF1O15321 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TM9SF1O15321 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TM9SF1O15321 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC21.55■■□□□ 1.04
TM9SF1O15321 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TM9SF1O15321 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TM9SF1O15321 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC21.55■■□□□ 1.04
TM9SF1O15321 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TM9SF1O15321 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
TM9SF1O15321 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TM9SF1O15321 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.55■■□□□ 1.04
TM9SF1O15321 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
TM9SF1O15321 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TM9SF1O15321 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TM9SF1O15321 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC21.55■■□□□ 1.04
TM9SF1O15321 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TM9SF1O15321 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
TM9SF1O15321 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
TM9SF1O15321 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
TM9SF1O15321 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TM9SF1O15321 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.55■■□□□ 1.04
TM9SF1O15321 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21.55■■□□□ 1.04
TM9SF1O15321 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
TM9SF1O15321 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TM9SF1O15321 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.54■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms