Protein–RNA interactions for Protein: O15266

SHOX, Short stature homeobox protein, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOXO15266 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
SHOXO15266 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.47■□□□□ 0.55
SHOXO15266 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SHOXO15266 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC18.47■□□□□ 0.55
SHOXO15266 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SHOXO15266 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
SHOXO15266 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SHOXO15266 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.47■□□□□ 0.55
SHOXO15266 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SHOXO15266 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SHOXO15266 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.46■□□□□ 0.55
SHOXO15266 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SHOXO15266 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.46■□□□□ 0.55
SHOXO15266 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC18.46■□□□□ 0.55
SHOXO15266 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC18.46■□□□□ 0.55
SHOXO15266 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SHOXO15266 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC18.46■□□□□ 0.55
SHOXO15266 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC18.46■□□□□ 0.55
SHOXO15266 PVT1_1.1-201ENST00000615125 194 ntBASIC18.46■□□□□ 0.55
SHOXO15266 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SHOXO15266 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SHOXO15266 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC18.46■□□□□ 0.55
SHOXO15266 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SHOXO15266 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SHOXO15266 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SHOXO15266 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SHOXO15266 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SHOXO15266 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SHOXO15266 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SHOXO15266 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
SHOXO15266 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.45■□□□□ 0.54
SHOXO15266 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SHOXO15266 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC18.45■□□□□ 0.54
SHOXO15266 AL033527.3-201ENST00000566366 1196 ntBASIC18.45■□□□□ 0.54
SHOXO15266 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SHOXO15266 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SHOXO15266 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
SHOXO15266 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.44■□□□□ 0.54
SHOXO15266 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SHOXO15266 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SHOXO15266 C11orf96-202ENST00000528572 1834 ntBASIC18.44■□□□□ 0.54
SHOXO15266 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
SHOXO15266 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
SHOXO15266 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
SHOXO15266 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
SHOXO15266 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
SHOXO15266 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
SHOXO15266 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SHOXO15266 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SHOXO15266 KRT18P24-201ENST00000344739 1156 ntBASIC18.44■□□□□ 0.54
SHOXO15266 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC18.44■□□□□ 0.54
SHOXO15266 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC18.44■□□□□ 0.54
SHOXO15266 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC18.44■□□□□ 0.54
SHOXO15266 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
SHOXO15266 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SHOXO15266 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SHOXO15266 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
SHOXO15266 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.44■□□□□ 0.54
SHOXO15266 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.43■□□□□ 0.54
SHOXO15266 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC18.43■□□□□ 0.54
SHOXO15266 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SHOXO15266 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SHOXO15266 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SHOXO15266 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SHOXO15266 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC18.43■□□□□ 0.54
SHOXO15266 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC18.43■□□□□ 0.54
SHOXO15266 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SHOXO15266 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC18.43■□□□□ 0.54
SHOXO15266 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SHOXO15266 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SHOXO15266 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
SHOXO15266 AL157384.1-201ENST00000445995 2473 ntBASIC18.43■□□□□ 0.54
SHOXO15266 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SHOXO15266 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SHOXO15266 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
SHOXO15266 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SHOXO15266 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
SHOXO15266 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SHOXO15266 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SHOXO15266 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
SHOXO15266 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SHOXO15266 EI24-213ENST00000618552 1747 ntTSL 5 BASIC18.42■□□□□ 0.54
SHOXO15266 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SHOXO15266 AC131274.2-201ENST00000580697 1507 ntBASIC18.42■□□□□ 0.54
SHOXO15266 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
SHOXO15266 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SHOXO15266 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SHOXO15266 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
SHOXO15266 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
SHOXO15266 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SHOXO15266 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SHOXO15266 LETM1P2-201ENST00000597330 2178 ntBASIC18.41■□□□□ 0.54
SHOXO15266 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.41■□□□□ 0.54
SHOXO15266 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SHOXO15266 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SHOXO15266 AC026471.1-201ENST00000564629 3026 ntBASIC18.41■□□□□ 0.54
SHOXO15266 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SHOXO15266 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC18.41■□□□□ 0.54
SHOXO15266 MIR4281-201ENST00000580852 62 ntBASIC18.41■□□□□ 0.54
SHOXO15266 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms