Protein–RNA interactions for Protein: O14788

TNFSF11, Tumor necrosis factor ligand superfamily member 11, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF11O14788 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.54■□□□□ 0.72
TNFSF11O14788 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
TNFSF11O14788 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.54■□□□□ 0.72
TNFSF11O14788 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TNFSF11O14788 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.54■□□□□ 0.72
TNFSF11O14788 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC19.54■□□□□ 0.72
TNFSF11O14788 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TNFSF11O14788 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
TNFSF11O14788 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.53■□□□□ 0.72
TNFSF11O14788 AC068473.5-201ENST00000616428 2072 ntBASIC19.53■□□□□ 0.72
TNFSF11O14788 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TNFSF11O14788 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
TNFSF11O14788 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TNFSF11O14788 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
TNFSF11O14788 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TNFSF11O14788 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.53■□□□□ 0.72
TNFSF11O14788 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.53■□□□□ 0.72
TNFSF11O14788 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.53■□□□□ 0.72
TNFSF11O14788 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.53■□□□□ 0.72
TNFSF11O14788 AC105233.4-201ENST00000642045 216 ntBASIC19.53■□□□□ 0.72
TNFSF11O14788 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
TNFSF11O14788 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TNFSF11O14788 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.52■□□□□ 0.72
TNFSF11O14788 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.52■□□□□ 0.72
TNFSF11O14788 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TNFSF11O14788 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TNFSF11O14788 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
TNFSF11O14788 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TNFSF11O14788 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TNFSF11O14788 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
TNFSF11O14788 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
TNFSF11O14788 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
TNFSF11O14788 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
TNFSF11O14788 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
TNFSF11O14788 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TNFSF11O14788 LTK-203ENST00000453182 2412 ntTSL 2 BASIC19.51■□□□□ 0.71
TNFSF11O14788 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TNFSF11O14788 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19.51■□□□□ 0.71
TNFSF11O14788 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.51■□□□□ 0.71
TNFSF11O14788 AC012414.1-201ENST00000556676 535 ntBASIC19.51■□□□□ 0.71
TNFSF11O14788 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC19.51■□□□□ 0.71
TNFSF11O14788 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
TNFSF11O14788 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TNFSF11O14788 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TNFSF11O14788 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TNFSF11O14788 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TNFSF11O14788 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
TNFSF11O14788 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.51■□□□□ 0.71
TNFSF11O14788 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
TNFSF11O14788 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TNFSF11O14788 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.5■□□□□ 0.71
TNFSF11O14788 MIR935-201ENST00000401179 91 ntBASIC19.5■□□□□ 0.71
TNFSF11O14788 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.5■□□□□ 0.71
TNFSF11O14788 AC079089.2-201ENST00000531211 1277 ntBASIC19.5■□□□□ 0.71
TNFSF11O14788 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.5■□□□□ 0.71
TNFSF11O14788 MIR6084-201ENST00000622012 110 ntBASIC19.5■□□□□ 0.71
TNFSF11O14788 AL358852.1-201ENST00000623174 1268 ntBASIC19.5■□□□□ 0.71
TNFSF11O14788 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TNFSF11O14788 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TNFSF11O14788 ESRRAP2-201ENST00000418437 1549 ntBASIC19.5■□□□□ 0.71
TNFSF11O14788 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
TNFSF11O14788 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.49■□□□□ 0.71
TNFSF11O14788 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TNFSF11O14788 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
TNFSF11O14788 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.49■□□□□ 0.71
TNFSF11O14788 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TNFSF11O14788 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TNFSF11O14788 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.49■□□□□ 0.71
TNFSF11O14788 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.49■□□□□ 0.71
TNFSF11O14788 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.49■□□□□ 0.71
TNFSF11O14788 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.49■□□□□ 0.71
TNFSF11O14788 AL354811.1-201ENST00000610286 706 ntBASIC19.49■□□□□ 0.71
TNFSF11O14788 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TNFSF11O14788 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TNFSF11O14788 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TNFSF11O14788 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TNFSF11O14788 AC137767.1-201ENST00000602918 1920 ntBASIC19.49■□□□□ 0.71
TNFSF11O14788 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TNFSF11O14788 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TNFSF11O14788 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TNFSF11O14788 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TNFSF11O14788 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TNFSF11O14788 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TNFSF11O14788 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TNFSF11O14788 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.48■□□□□ 0.71
TNFSF11O14788 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TNFSF11O14788 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TNFSF11O14788 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TNFSF11O14788 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TNFSF11O14788 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
TNFSF11O14788 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
TNFSF11O14788 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TNFSF11O14788 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.48■□□□□ 0.71
TNFSF11O14788 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TNFSF11O14788 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.47■□□□□ 0.71
TNFSF11O14788 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TNFSF11O14788 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TNFSF11O14788 SMUG1P1-201ENST00000590640 811 ntBASIC19.47■□□□□ 0.71
TNFSF11O14788 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
TNFSF11O14788 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms