Protein–RNA interactions for Protein: O00300

TNFRSF11B, Tumor necrosis factor receptor superfamily member 11B, humanhuman

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11BO00300 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TNFRSF11BO00300 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.09■□□□□ 0.81
TNFRSF11BO00300 AC103834.1-201ENST00000520383 144 ntBASIC20.09■□□□□ 0.81
TNFRSF11BO00300 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.09■□□□□ 0.81
TNFRSF11BO00300 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.09■□□□□ 0.81
TNFRSF11BO00300 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TNFRSF11BO00300 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.09■□□□□ 0.81
TNFRSF11BO00300 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
TNFRSF11BO00300 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
TNFRSF11BO00300 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TNFRSF11BO00300 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TNFRSF11BO00300 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.09■□□□□ 0.81
TNFRSF11BO00300 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TNFRSF11BO00300 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
TNFRSF11BO00300 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TNFRSF11BO00300 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TNFRSF11BO00300 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
TNFRSF11BO00300 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TNFRSF11BO00300 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
TNFRSF11BO00300 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.08■□□□□ 0.81
TNFRSF11BO00300 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TNFRSF11BO00300 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TNFRSF11BO00300 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TNFRSF11BO00300 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
TNFRSF11BO00300 AC103724.3-201ENST00000564481 992 ntBASIC20.08■□□□□ 0.81
TNFRSF11BO00300 TK2-216ENST00000564917 1156 ntTSL 3 BASIC20.08■□□□□ 0.81
TNFRSF11BO00300 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC20.08■□□□□ 0.81
TNFRSF11BO00300 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.81
TNFRSF11BO00300 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.08■□□□□ 0.81
TNFRSF11BO00300 CA15P2-201ENST00000611168 834 ntBASIC20.08■□□□□ 0.81
TNFRSF11BO00300 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.8
TNFRSF11BO00300 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TNFRSF11BO00300 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TNFRSF11BO00300 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.08■□□□□ 0.8
TNFRSF11BO00300 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.8
TNFRSF11BO00300 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.08■□□□□ 0.8
TNFRSF11BO00300 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TNFRSF11BO00300 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.07■□□□□ 0.8
TNFRSF11BO00300 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TNFRSF11BO00300 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TNFRSF11BO00300 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TNFRSF11BO00300 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TNFRSF11BO00300 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
TNFRSF11BO00300 YBX1P4-201ENST00000392794 808 ntBASIC20.07■□□□□ 0.8
TNFRSF11BO00300 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TNFRSF11BO00300 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.07■□□□□ 0.8
TNFRSF11BO00300 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TNFRSF11BO00300 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
TNFRSF11BO00300 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.07■□□□□ 0.8
TNFRSF11BO00300 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.07■□□□□ 0.8
TNFRSF11BO00300 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
TNFRSF11BO00300 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.07■□□□□ 0.8
TNFRSF11BO00300 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TNFRSF11BO00300 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TNFRSF11BO00300 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TNFRSF11BO00300 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
TNFRSF11BO00300 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.06■□□□□ 0.8
TNFRSF11BO00300 KRT8P33-201ENST00000508125 1423 ntBASIC20.06■□□□□ 0.8
TNFRSF11BO00300 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TNFRSF11BO00300 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TNFRSF11BO00300 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TNFRSF11BO00300 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TNFRSF11BO00300 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
TNFRSF11BO00300 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TNFRSF11BO00300 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TNFRSF11BO00300 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TNFRSF11BO00300 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TNFRSF11BO00300 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TNFRSF11BO00300 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TNFRSF11BO00300 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TNFRSF11BO00300 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
TNFRSF11BO00300 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TNFRSF11BO00300 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.05■□□□□ 0.8
TNFRSF11BO00300 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC20.05■□□□□ 0.8
TNFRSF11BO00300 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
TNFRSF11BO00300 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.05■□□□□ 0.8
TNFRSF11BO00300 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TNFRSF11BO00300 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TNFRSF11BO00300 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.04■□□□□ 0.8
TNFRSF11BO00300 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TNFRSF11BO00300 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.04■□□□□ 0.8
TNFRSF11BO00300 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.04■□□□□ 0.8
TNFRSF11BO00300 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
TNFRSF11BO00300 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
TNFRSF11BO00300 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.04■□□□□ 0.8
TNFRSF11BO00300 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TNFRSF11BO00300 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TNFRSF11BO00300 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TNFRSF11BO00300 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
TNFRSF11BO00300 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.03■□□□□ 0.8
TNFRSF11BO00300 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.03■□□□□ 0.8
TNFRSF11BO00300 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
TNFRSF11BO00300 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
TNFRSF11BO00300 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TNFRSF11BO00300 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TNFRSF11BO00300 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TNFRSF11BO00300 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
TNFRSF11BO00300 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.03■□□□□ 0.8
TNFRSF11BO00300 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
TNFRSF11BO00300 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms