Protein–RNA interactions for Protein: B0FP48

UPK3BL1, Uroplakin-3b-like protein 1, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BL1B0FP48 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
UPK3BL1B0FP48 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
UPK3BL1B0FP48 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
UPK3BL1B0FP48 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC22■■□□□ 1.11
UPK3BL1B0FP48 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC22■■□□□ 1.11
UPK3BL1B0FP48 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC22■■□□□ 1.11
UPK3BL1B0FP48 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC22■■□□□ 1.11
UPK3BL1B0FP48 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC22■■□□□ 1.11
UPK3BL1B0FP48 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
UPK3BL1B0FP48 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
UPK3BL1B0FP48 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC22■■□□□ 1.11
UPK3BL1B0FP48 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC22■■□□□ 1.11
UPK3BL1B0FP48 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC22■■□□□ 1.11
UPK3BL1B0FP48 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC22■■□□□ 1.11
UPK3BL1B0FP48 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC22■■□□□ 1.11
UPK3BL1B0FP48 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
UPK3BL1B0FP48 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC22■■□□□ 1.11
UPK3BL1B0FP48 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
UPK3BL1B0FP48 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
UPK3BL1B0FP48 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
UPK3BL1B0FP48 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
UPK3BL1B0FP48 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC21.99■■□□□ 1.11
UPK3BL1B0FP48 DUSP8P5-201ENST00000422884 1815 ntBASIC21.99■■□□□ 1.11
UPK3BL1B0FP48 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
UPK3BL1B0FP48 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
UPK3BL1B0FP48 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
UPK3BL1B0FP48 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC21.99■■□□□ 1.11
UPK3BL1B0FP48 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC21.99■■□□□ 1.11
UPK3BL1B0FP48 TK2-208ENST00000545043 1120 ntTSL 2 BASIC21.99■■□□□ 1.11
UPK3BL1B0FP48 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
UPK3BL1B0FP48 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
UPK3BL1B0FP48 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
UPK3BL1B0FP48 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
UPK3BL1B0FP48 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
UPK3BL1B0FP48 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
UPK3BL1B0FP48 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
UPK3BL1B0FP48 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.98■■□□□ 1.11
UPK3BL1B0FP48 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
UPK3BL1B0FP48 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
UPK3BL1B0FP48 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC21.97■■□□□ 1.11
UPK3BL1B0FP48 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC21.97■■□□□ 1.11
UPK3BL1B0FP48 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
UPK3BL1B0FP48 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
UPK3BL1B0FP48 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
UPK3BL1B0FP48 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
UPK3BL1B0FP48 LHPP-203ENST00000392757 840 ntTSL 3 BASIC21.97■■□□□ 1.11
UPK3BL1B0FP48 AC010141.3-201ENST00000456659 717 ntBASIC21.97■■□□□ 1.11
UPK3BL1B0FP48 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC21.97■■□□□ 1.11
UPK3BL1B0FP48 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.97■■□□□ 1.11
UPK3BL1B0FP48 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
UPK3BL1B0FP48 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
UPK3BL1B0FP48 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
UPK3BL1B0FP48 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.97■■□□□ 1.11
UPK3BL1B0FP48 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.96■■□□□ 1.11
UPK3BL1B0FP48 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.96■■□□□ 1.11
UPK3BL1B0FP48 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
UPK3BL1B0FP48 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.96■■□□□ 1.11
UPK3BL1B0FP48 USP45-205ENST00000472914 1617 ntTSL 5 BASIC21.96■■□□□ 1.11
UPK3BL1B0FP48 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
UPK3BL1B0FP48 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
UPK3BL1B0FP48 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC21.96■■□□□ 1.11
UPK3BL1B0FP48 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC21.96■■□□□ 1.11
UPK3BL1B0FP48 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
UPK3BL1B0FP48 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
UPK3BL1B0FP48 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
UPK3BL1B0FP48 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
UPK3BL1B0FP48 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
UPK3BL1B0FP48 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
UPK3BL1B0FP48 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
UPK3BL1B0FP48 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.96■■□□□ 1.11
UPK3BL1B0FP48 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
UPK3BL1B0FP48 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
UPK3BL1B0FP48 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.95■■□□□ 1.1
UPK3BL1B0FP48 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.95■■□□□ 1.1
UPK3BL1B0FP48 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21.95■■□□□ 1.1
UPK3BL1B0FP48 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
UPK3BL1B0FP48 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.95■■□□□ 1.1
UPK3BL1B0FP48 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
UPK3BL1B0FP48 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.95■■□□□ 1.1
UPK3BL1B0FP48 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
UPK3BL1B0FP48 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC21.95■■□□□ 1.1
UPK3BL1B0FP48 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC21.95■■□□□ 1.1
UPK3BL1B0FP48 AC080038.1-201ENST00000611274 1154 ntBASIC21.95■■□□□ 1.1
UPK3BL1B0FP48 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
UPK3BL1B0FP48 LINC01960-201ENST00000563759 1884 ntBASIC21.94■■□□□ 1.1
UPK3BL1B0FP48 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.94■■□□□ 1.1
UPK3BL1B0FP48 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
UPK3BL1B0FP48 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC21.94■■□□□ 1.1
UPK3BL1B0FP48 AC006015.1-201ENST00000429970 570 ntBASIC21.94■■□□□ 1.1
UPK3BL1B0FP48 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
UPK3BL1B0FP48 RAP2CP1-201ENST00000605103 478 ntBASIC21.94■■□□□ 1.1
UPK3BL1B0FP48 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC21.94■■□□□ 1.1
UPK3BL1B0FP48 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
UPK3BL1B0FP48 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
UPK3BL1B0FP48 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
UPK3BL1B0FP48 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
UPK3BL1B0FP48 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
UPK3BL1B0FP48 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
UPK3BL1B0FP48 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
UPK3BL1B0FP48 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms