Protein–RNA interactions for Protein: A2RUR9

CCDC144A, Coiled-coil domain-containing protein 144A, humanhuman

Predictions only

Length 1,427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144AA2RUR9 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
CCDC144AA2RUR9 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
CCDC144AA2RUR9 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
CCDC144AA2RUR9 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
CCDC144AA2RUR9 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
CCDC144AA2RUR9 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
CCDC144AA2RUR9 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC31.54■■■□□ 2.64
CCDC144AA2RUR9 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
CCDC144AA2RUR9 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC31.53■■■□□ 2.64
CCDC144AA2RUR9 STX7-201ENST00000367937 1090 ntTSL 5 BASIC31.53■■■□□ 2.64
CCDC144AA2RUR9 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC31.53■■■□□ 2.64
CCDC144AA2RUR9 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
CCDC144AA2RUR9 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
CCDC144AA2RUR9 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
CCDC144AA2RUR9 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC31.52■■■□□ 2.64
CCDC144AA2RUR9 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
CCDC144AA2RUR9 AC079140.4-201ENST00000507448 529 ntBASIC31.52■■■□□ 2.64
CCDC144AA2RUR9 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC31.52■■■□□ 2.64
CCDC144AA2RUR9 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC31.52■■■□□ 2.64
CCDC144AA2RUR9 AC137761.2-201ENST00000561729 223 ntBASIC31.52■■■□□ 2.64
CCDC144AA2RUR9 AC145350.3-201ENST00000569033 163 ntBASIC31.52■■■□□ 2.64
CCDC144AA2RUR9 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC31.52■■■□□ 2.64
CCDC144AA2RUR9 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC31.52■■■□□ 2.64
CCDC144AA2RUR9 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC31.52■■■□□ 2.64
CCDC144AA2RUR9 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC31.51■■■□□ 2.64
CCDC144AA2RUR9 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC31.51■■■□□ 2.64
CCDC144AA2RUR9 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC31.51■■■□□ 2.64
CCDC144AA2RUR9 HSCB-202ENST00000398941 955 ntTSL 2 BASIC31.51■■■□□ 2.64
CCDC144AA2RUR9 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
CCDC144AA2RUR9 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC31.51■■■□□ 2.63
CCDC144AA2RUR9 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC31.51■■■□□ 2.63
CCDC144AA2RUR9 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC31.5■■■□□ 2.63
CCDC144AA2RUR9 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC31.5■■■□□ 2.63
CCDC144AA2RUR9 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC31.5■■■□□ 2.63
CCDC144AA2RUR9 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC31.5■■■□□ 2.63
CCDC144AA2RUR9 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC31.49■■■□□ 2.63
CCDC144AA2RUR9 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
CCDC144AA2RUR9 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC31.49■■■□□ 2.63
CCDC144AA2RUR9 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC31.49■■■□□ 2.63
CCDC144AA2RUR9 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
CCDC144AA2RUR9 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC31.49■■■□□ 2.63
CCDC144AA2RUR9 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
CCDC144AA2RUR9 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC31.49■■■□□ 2.63
CCDC144AA2RUR9 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC31.49■■■□□ 2.63
CCDC144AA2RUR9 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC31.49■■■□□ 2.63
CCDC144AA2RUR9 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
CCDC144AA2RUR9 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC31.48■■■□□ 2.63
CCDC144AA2RUR9 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC31.48■■■□□ 2.63
CCDC144AA2RUR9 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
CCDC144AA2RUR9 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC31.48■■■□□ 2.63
CCDC144AA2RUR9 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC31.47■■■□□ 2.63
CCDC144AA2RUR9 AC009237.3-201ENST00000393279 1427 ntBASIC31.47■■■□□ 2.63
CCDC144AA2RUR9 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
CCDC144AA2RUR9 AC016769.1-201ENST00000409132 1010 ntBASIC31.47■■■□□ 2.63
CCDC144AA2RUR9 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC31.47■■■□□ 2.63
CCDC144AA2RUR9 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
CCDC144AA2RUR9 KRT19P1-201ENST00000405746 1186 ntBASIC31.46■■■□□ 2.63
CCDC144AA2RUR9 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC31.46■■■□□ 2.63
CCDC144AA2RUR9 AC079089.2-201ENST00000531211 1277 ntBASIC31.46■■■□□ 2.63
CCDC144AA2RUR9 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC31.46■■■□□ 2.63
CCDC144AA2RUR9 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
CCDC144AA2RUR9 WWOX-218ENST00000627394 894 ntTSL 5 BASIC31.46■■■□□ 2.63
CCDC144AA2RUR9 PXK-203ENST00000383715 1756 ntTSL 5 BASIC31.45■■■□□ 2.63
CCDC144AA2RUR9 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC31.45■■■□□ 2.63
CCDC144AA2RUR9 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC31.45■■■□□ 2.63
CCDC144AA2RUR9 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC31.45■■■□□ 2.63
CCDC144AA2RUR9 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC31.45■■■□□ 2.62
CCDC144AA2RUR9 KRT87P-202ENST00000534226 1464 ntBASIC31.45■■■□□ 2.62
CCDC144AA2RUR9 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC31.44■■■□□ 2.62
CCDC144AA2RUR9 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC31.44■■■□□ 2.62
CCDC144AA2RUR9 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC31.44■■■□□ 2.62
CCDC144AA2RUR9 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC31.44■■■□□ 2.62
CCDC144AA2RUR9 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
CCDC144AA2RUR9 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
CCDC144AA2RUR9 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
CCDC144AA2RUR9 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
CCDC144AA2RUR9 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
CCDC144AA2RUR9 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC31.43■■■□□ 2.62
CCDC144AA2RUR9 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC31.43■■■□□ 2.62
CCDC144AA2RUR9 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC31.43■■■□□ 2.62
CCDC144AA2RUR9 RAP2CP1-201ENST00000605103 478 ntBASIC31.43■■■□□ 2.62
CCDC144AA2RUR9 THRA-202ENST00000394121 2260 ntTSL 2 BASIC31.43■■■□□ 2.62
CCDC144AA2RUR9 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
CCDC144AA2RUR9 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
CCDC144AA2RUR9 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
CCDC144AA2RUR9 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC31.42■■■□□ 2.62
CCDC144AA2RUR9 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC31.42■■■□□ 2.62
CCDC144AA2RUR9 GAS2L1P2-201ENST00000436355 1356 ntBASIC31.42■■■□□ 2.62
CCDC144AA2RUR9 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC31.42■■■□□ 2.62
CCDC144AA2RUR9 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC31.42■■■□□ 2.62
CCDC144AA2RUR9 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC31.42■■■□□ 2.62
CCDC144AA2RUR9 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC31.41■■■□□ 2.62
CCDC144AA2RUR9 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
CCDC144AA2RUR9 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC31.41■■■□□ 2.62
CCDC144AA2RUR9 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
CCDC144AA2RUR9 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
CCDC144AA2RUR9 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC31.41■■■□□ 2.62
CCDC144AA2RUR9 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC31.41■■■□□ 2.62
CCDC144AA2RUR9 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC31.41■■■□□ 2.62
CCDC144AA2RUR9 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC31.41■■■□□ 2.62
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms