Protein–RNA interactions for Protein: A1A4G5

LNP1, Leukemia NUP98 fusion partner 1, humanhuman

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LNP1A1A4G5 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
LNP1A1A4G5 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
LNP1A1A4G5 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
LNP1A1A4G5 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
LNP1A1A4G5 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
LNP1A1A4G5 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
LNP1A1A4G5 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
LNP1A1A4G5 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC21.33■■□□□ 1.01
LNP1A1A4G5 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC21.33■■□□□ 1.01
LNP1A1A4G5 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC21.33■■□□□ 1
LNP1A1A4G5 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
LNP1A1A4G5 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
LNP1A1A4G5 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
LNP1A1A4G5 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
LNP1A1A4G5 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC21.32■■□□□ 1
LNP1A1A4G5 AC079630.1-202ENST00000618127 1840 ntBASIC21.32■■□□□ 1
LNP1A1A4G5 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC21.32■■□□□ 1
LNP1A1A4G5 AC009237.3-201ENST00000393279 1427 ntBASIC21.32■■□□□ 1
LNP1A1A4G5 PRORSD1P-201ENST00000295112 541 ntBASIC21.32■■□□□ 1
LNP1A1A4G5 APTR-203ENST00000430801 583 ntTSL 5 BASIC21.32■■□□□ 1
LNP1A1A4G5 RNA5SP413-201ENST00000516373 109 ntBASIC21.32■■□□□ 1
LNP1A1A4G5 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
LNP1A1A4G5 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
LNP1A1A4G5 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC21.32■■□□□ 1
LNP1A1A4G5 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC21.32■■□□□ 1
LNP1A1A4G5 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
LNP1A1A4G5 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
LNP1A1A4G5 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC21.32■■□□□ 1
LNP1A1A4G5 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC21.31■■□□□ 1
LNP1A1A4G5 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC21.31■■□□□ 1
LNP1A1A4G5 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LNP1A1A4G5 USP45-205ENST00000472914 1617 ntTSL 5 BASIC21.31■■□□□ 1
LNP1A1A4G5 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC21.31■■□□□ 1
LNP1A1A4G5 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC21.31■■□□□ 1
LNP1A1A4G5 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC21.31■■□□□ 1
LNP1A1A4G5 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LNP1A1A4G5 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LNP1A1A4G5 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21.3■■□□□ 1
LNP1A1A4G5 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LNP1A1A4G5 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
LNP1A1A4G5 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
LNP1A1A4G5 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC21.3■■□□□ 1
LNP1A1A4G5 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC21.3■■□□□ 1
LNP1A1A4G5 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC21.3■■□□□ 1
LNP1A1A4G5 MIR4758-201ENST00000577688 71 ntBASIC21.3■■□□□ 1
LNP1A1A4G5 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
LNP1A1A4G5 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LNP1A1A4G5 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
LNP1A1A4G5 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
LNP1A1A4G5 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC21.29■■□□□ 1
LNP1A1A4G5 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LNP1A1A4G5 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
LNP1A1A4G5 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC21.29■■□□□ 1
LNP1A1A4G5 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC21.29■■□□□ 1
LNP1A1A4G5 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
LNP1A1A4G5 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LNP1A1A4G5 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LNP1A1A4G5 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LNP1A1A4G5 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
LNP1A1A4G5 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LNP1A1A4G5 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC21.28■■□□□ 1
LNP1A1A4G5 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LNP1A1A4G5 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
LNP1A1A4G5 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC21.28■■□□□ 1
LNP1A1A4G5 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC21.28■■□□□ 1
LNP1A1A4G5 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
LNP1A1A4G5 AC010536.3-201ENST00000620306 533 ntBASIC21.28■■□□□ 1
LNP1A1A4G5 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
LNP1A1A4G5 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC21.28■■□□□ 1
LNP1A1A4G5 MFF-207ENST00000409565 1548 ntTSL 2 BASIC21.28■■□□□ 1
LNP1A1A4G5 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC21.28■■□□□ 1
LNP1A1A4G5 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LNP1A1A4G5 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
LNP1A1A4G5 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC21.27■■□□□ 1
LNP1A1A4G5 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
LNP1A1A4G5 RPS2P52-201ENST00000469610 820 ntBASIC21.27■■□□□ 1
LNP1A1A4G5 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC21.27■■□□□ 1
LNP1A1A4G5 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.27■■□□□ 1
LNP1A1A4G5 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
LNP1A1A4G5 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
LNP1A1A4G5 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
LNP1A1A4G5 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
LNP1A1A4G5 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
LNP1A1A4G5 PXK-203ENST00000383715 1756 ntTSL 5 BASIC21.26■□□□□ 0.99
LNP1A1A4G5 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
LNP1A1A4G5 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LNP1A1A4G5 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
LNP1A1A4G5 SERP1-208ENST00000491660 830 ntTSL 2 BASIC21.26■□□□□ 0.99
LNP1A1A4G5 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC21.26■□□□□ 0.99
LNP1A1A4G5 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
LNP1A1A4G5 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC21.26■□□□□ 0.99
LNP1A1A4G5 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LNP1A1A4G5 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
LNP1A1A4G5 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
LNP1A1A4G5 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
LNP1A1A4G5 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LNP1A1A4G5 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
LNP1A1A4G5 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC21.25■□□□□ 0.99
LNP1A1A4G5 AL353803.4-201ENST00000565882 1934 ntBASIC21.25■□□□□ 0.99
LNP1A1A4G5 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms