Protein–RNA interactions for Protein: A0A0K0K1D8

TRBV6-1, T-cell receptor beta variable 6-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-1A0A0K0K1D8 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRBV6-1A0A0K0K1D8 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC16.28■□□□□ 0.2
TRBV6-1A0A0K0K1D8 MIR6722-201ENST00000617286 78 ntBASIC16.28■□□□□ 0.2
TRBV6-1A0A0K0K1D8 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC16.28■□□□□ 0.2
TRBV6-1A0A0K0K1D8 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRBV6-1A0A0K0K1D8 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRBV6-1A0A0K0K1D8 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
TRBV6-1A0A0K0K1D8 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRBV6-1A0A0K0K1D8 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC16.28■□□□□ 0.2
TRBV6-1A0A0K0K1D8 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC16.28■□□□□ 0.2
TRBV6-1A0A0K0K1D8 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
TRBV6-1A0A0K0K1D8 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRBV6-1A0A0K0K1D8 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
TRBV6-1A0A0K0K1D8 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC16.28■□□□□ 0.2
TRBV6-1A0A0K0K1D8 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRBV6-1A0A0K0K1D8 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRBV6-1A0A0K0K1D8 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRBV6-1A0A0K0K1D8 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TRBV6-1A0A0K0K1D8 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC16.27■□□□□ 0.2
TRBV6-1A0A0K0K1D8 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRBV6-1A0A0K0K1D8 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC16.27■□□□□ 0.2
TRBV6-1A0A0K0K1D8 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRBV6-1A0A0K0K1D8 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
TRBV6-1A0A0K0K1D8 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRBV6-1A0A0K0K1D8 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC16.27■□□□□ 0.2
TRBV6-1A0A0K0K1D8 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRBV6-1A0A0K0K1D8 MBP-237ENST00000579129 1052 ntTSL 5 BASIC16.27■□□□□ 0.2
TRBV6-1A0A0K0K1D8 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC16.27■□□□□ 0.2
TRBV6-1A0A0K0K1D8 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC16.27■□□□□ 0.2
TRBV6-1A0A0K0K1D8 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
TRBV6-1A0A0K0K1D8 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC16.27■□□□□ 0.19
TRBV6-1A0A0K0K1D8 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
TRBV6-1A0A0K0K1D8 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
TRBV6-1A0A0K0K1D8 AC004687.1-201ENST00000579003 1625 ntBASIC16.27■□□□□ 0.19
TRBV6-1A0A0K0K1D8 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV6-1A0A0K0K1D8 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV6-1A0A0K0K1D8 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV6-1A0A0K0K1D8 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV6-1A0A0K0K1D8 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV6-1A0A0K0K1D8 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC16.26■□□□□ 0.19
TRBV6-1A0A0K0K1D8 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV6-1A0A0K0K1D8 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV6-1A0A0K0K1D8 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
TRBV6-1A0A0K0K1D8 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV6-1A0A0K0K1D8 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC16.26■□□□□ 0.19
TRBV6-1A0A0K0K1D8 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV6-1A0A0K0K1D8 AL121603.2-201ENST00000557373 2117 ntBASIC16.26■□□□□ 0.19
TRBV6-1A0A0K0K1D8 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV6-1A0A0K0K1D8 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV6-1A0A0K0K1D8 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV6-1A0A0K0K1D8 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV6-1A0A0K0K1D8 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC16.26■□□□□ 0.19
TRBV6-1A0A0K0K1D8 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV6-1A0A0K0K1D8 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV6-1A0A0K0K1D8 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV6-1A0A0K0K1D8 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV6-1A0A0K0K1D8 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV6-1A0A0K0K1D8 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV6-1A0A0K0K1D8 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV6-1A0A0K0K1D8 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV6-1A0A0K0K1D8 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV6-1A0A0K0K1D8 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV6-1A0A0K0K1D8 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
TRBV6-1A0A0K0K1D8 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC16.25■□□□□ 0.19
TRBV6-1A0A0K0K1D8 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRBV6-1A0A0K0K1D8 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRBV6-1A0A0K0K1D8 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRBV6-1A0A0K0K1D8 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRBV6-1A0A0K0K1D8 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC16.25■□□□□ 0.19
TRBV6-1A0A0K0K1D8 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRBV6-1A0A0K0K1D8 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRBV6-1A0A0K0K1D8 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRBV6-1A0A0K0K1D8 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRBV6-1A0A0K0K1D8 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC16.25■□□□□ 0.19
TRBV6-1A0A0K0K1D8 AC104564.3-201ENST00000582367 638 ntBASIC16.25■□□□□ 0.19
TRBV6-1A0A0K0K1D8 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
TRBV6-1A0A0K0K1D8 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC16.25■□□□□ 0.19
TRBV6-1A0A0K0K1D8 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRBV6-1A0A0K0K1D8 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRBV6-1A0A0K0K1D8 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRBV6-1A0A0K0K1D8 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRBV6-1A0A0K0K1D8 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC16.25■□□□□ 0.19
TRBV6-1A0A0K0K1D8 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
TRBV6-1A0A0K0K1D8 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRBV6-1A0A0K0K1D8 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC16.24■□□□□ 0.19
TRBV6-1A0A0K0K1D8 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC16.24■□□□□ 0.19
TRBV6-1A0A0K0K1D8 DUX4L18-201ENST00000553347 1267 ntBASIC16.24■□□□□ 0.19
TRBV6-1A0A0K0K1D8 PVT1_1.1-201ENST00000615125 194 ntBASIC16.24■□□□□ 0.19
TRBV6-1A0A0K0K1D8 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRBV6-1A0A0K0K1D8 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRBV6-1A0A0K0K1D8 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRBV6-1A0A0K0K1D8 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC16.24■□□□□ 0.19
TRBV6-1A0A0K0K1D8 OXCT2P1-201ENST00000447263 1535 ntBASIC16.24■□□□□ 0.19
TRBV6-1A0A0K0K1D8 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRBV6-1A0A0K0K1D8 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
TRBV6-1A0A0K0K1D8 ME2-206ENST00000638410 2289 ntTSL 5 BASIC16.24■□□□□ 0.19
TRBV6-1A0A0K0K1D8 ME2-210ENST00000639255 2262 ntTSL 5 BASIC16.24■□□□□ 0.19
TRBV6-1A0A0K0K1D8 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC16.23■□□□□ 0.19
TRBV6-1A0A0K0K1D8 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC16.23■□□□□ 0.19
TRBV6-1A0A0K0K1D8 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms