Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC21.74■■□□□ 1.07
CCDC163A0A0D9SF12 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC163A0A0D9SF12 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
CCDC163A0A0D9SF12 AP001160.3-201ENST00000601484 763 ntBASIC21.74■■□□□ 1.07
CCDC163A0A0D9SF12 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
CCDC163A0A0D9SF12 AC142381.3-201ENST00000568208 1670 ntBASIC21.74■■□□□ 1.07
CCDC163A0A0D9SF12 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC163A0A0D9SF12 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC163A0A0D9SF12 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
CCDC163A0A0D9SF12 AL353803.4-201ENST00000565882 1934 ntBASIC21.73■■□□□ 1.07
CCDC163A0A0D9SF12 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.07
CCDC163A0A0D9SF12 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC163A0A0D9SF12 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
CCDC163A0A0D9SF12 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC21.73■■□□□ 1.07
CCDC163A0A0D9SF12 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC21.73■■□□□ 1.07
CCDC163A0A0D9SF12 BRI3-207ENST00000539286 699 ntTSL 2 BASIC21.73■■□□□ 1.07
CCDC163A0A0D9SF12 KRT18P20-201ENST00000548986 1279 ntBASIC21.73■■□□□ 1.07
CCDC163A0A0D9SF12 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC21.73■■□□□ 1.07
CCDC163A0A0D9SF12 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC163A0A0D9SF12 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC163A0A0D9SF12 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC21.73■■□□□ 1.07
CCDC163A0A0D9SF12 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC163A0A0D9SF12 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC163A0A0D9SF12 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC21.72■■□□□ 1.07
CCDC163A0A0D9SF12 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC163A0A0D9SF12 MFF-207ENST00000409565 1548 ntTSL 2 BASIC21.72■■□□□ 1.07
CCDC163A0A0D9SF12 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC21.72■■□□□ 1.07
CCDC163A0A0D9SF12 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC163A0A0D9SF12 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC21.72■■□□□ 1.07
CCDC163A0A0D9SF12 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
CCDC163A0A0D9SF12 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC163A0A0D9SF12 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC163A0A0D9SF12 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC21.72■■□□□ 1.07
CCDC163A0A0D9SF12 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC163A0A0D9SF12 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC163A0A0D9SF12 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC163A0A0D9SF12 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC163A0A0D9SF12 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC163A0A0D9SF12 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC21.71■■□□□ 1.07
CCDC163A0A0D9SF12 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC21.71■■□□□ 1.07
CCDC163A0A0D9SF12 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC21.71■■□□□ 1.07
CCDC163A0A0D9SF12 MIR4651-201ENST00000582622 73 ntBASIC21.71■■□□□ 1.07
CCDC163A0A0D9SF12 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC163A0A0D9SF12 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC163A0A0D9SF12 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC163A0A0D9SF12 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC163A0A0D9SF12 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC163A0A0D9SF12 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
CCDC163A0A0D9SF12 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
CCDC163A0A0D9SF12 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC163A0A0D9SF12 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC163A0A0D9SF12 CNN2P6-201ENST00000439038 900 ntBASIC21.7■■□□□ 1.06
CCDC163A0A0D9SF12 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC21.7■■□□□ 1.06
CCDC163A0A0D9SF12 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
CCDC163A0A0D9SF12 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC21.7■■□□□ 1.06
CCDC163A0A0D9SF12 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
CCDC163A0A0D9SF12 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21.7■■□□□ 1.06
CCDC163A0A0D9SF12 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC163A0A0D9SF12 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC163A0A0D9SF12 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC21.7■■□□□ 1.06
CCDC163A0A0D9SF12 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC163A0A0D9SF12 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC163A0A0D9SF12 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC163A0A0D9SF12 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC163A0A0D9SF12 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC163A0A0D9SF12 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
CCDC163A0A0D9SF12 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC163A0A0D9SF12 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC163A0A0D9SF12 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC21.69■■□□□ 1.06
CCDC163A0A0D9SF12 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC163A0A0D9SF12 TBCB-214ENST00000629269 413 ntTSL 5 BASIC21.69■■□□□ 1.06
CCDC163A0A0D9SF12 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC163A0A0D9SF12 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC163A0A0D9SF12 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC163A0A0D9SF12 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC163A0A0D9SF12 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC21.68■■□□□ 1.06
CCDC163A0A0D9SF12 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC21.68■■□□□ 1.06
CCDC163A0A0D9SF12 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC163A0A0D9SF12 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC163A0A0D9SF12 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC21.67■■□□□ 1.06
CCDC163A0A0D9SF12 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCDC163A0A0D9SF12 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
CCDC163A0A0D9SF12 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC21.67■■□□□ 1.06
CCDC163A0A0D9SF12 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC21.67■■□□□ 1.06
CCDC163A0A0D9SF12 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCDC163A0A0D9SF12 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC21.67■■□□□ 1.06
CCDC163A0A0D9SF12 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
CCDC163A0A0D9SF12 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC21.67■■□□□ 1.06
CCDC163A0A0D9SF12 AC105036.2-201ENST00000569468 176 ntBASIC21.67■■□□□ 1.06
CCDC163A0A0D9SF12 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC21.67■■□□□ 1.06
CCDC163A0A0D9SF12 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC21.67■■□□□ 1.06
CCDC163A0A0D9SF12 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CCDC163A0A0D9SF12 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCDC163A0A0D9SF12 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC163A0A0D9SF12 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC163A0A0D9SF12 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC163A0A0D9SF12 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC163A0A0D9SF12 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC163A0A0D9SF12 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC21.66■■□□□ 1.06
CCDC163A0A0D9SF12 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms