Protein–RNA interactions for Protein: A0A0B4J275

TRAV17, T-cell receptor alpha variable 17 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17A0A0B4J275 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.81■□□□□ 0.76
TRAV17A0A0B4J275 RAP2CP1-201ENST00000605103 478 ntBASIC19.81■□□□□ 0.76
TRAV17A0A0B4J275 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRAV17A0A0B4J275 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
TRAV17A0A0B4J275 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
TRAV17A0A0B4J275 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRAV17A0A0B4J275 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TRAV17A0A0B4J275 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRAV17A0A0B4J275 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
TRAV17A0A0B4J275 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC19.8■□□□□ 0.76
TRAV17A0A0B4J275 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC19.8■□□□□ 0.76
TRAV17A0A0B4J275 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC19.8■□□□□ 0.76
TRAV17A0A0B4J275 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC19.8■□□□□ 0.76
TRAV17A0A0B4J275 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRAV17A0A0B4J275 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC19.8■□□□□ 0.76
TRAV17A0A0B4J275 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
TRAV17A0A0B4J275 AC005224.4-201ENST00000583262 1652 ntBASIC19.8■□□□□ 0.76
TRAV17A0A0B4J275 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRAV17A0A0B4J275 ESRRAP2-201ENST00000418437 1549 ntBASIC19.8■□□□□ 0.76
TRAV17A0A0B4J275 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRAV17A0A0B4J275 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC19.8■□□□□ 0.76
TRAV17A0A0B4J275 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRAV17A0A0B4J275 ANOS2P-203ENST00000472227 1816 ntBASIC19.79■□□□□ 0.76
TRAV17A0A0B4J275 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRAV17A0A0B4J275 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRAV17A0A0B4J275 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRAV17A0A0B4J275 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.79■□□□□ 0.76
TRAV17A0A0B4J275 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC19.79■□□□□ 0.76
TRAV17A0A0B4J275 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRAV17A0A0B4J275 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TRAV17A0A0B4J275 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRAV17A0A0B4J275 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.79■□□□□ 0.76
TRAV17A0A0B4J275 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRAV17A0A0B4J275 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRAV17A0A0B4J275 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
TRAV17A0A0B4J275 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TRAV17A0A0B4J275 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRAV17A0A0B4J275 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRAV17A0A0B4J275 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRAV17A0A0B4J275 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRAV17A0A0B4J275 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TRAV17A0A0B4J275 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC19.78■□□□□ 0.76
TRAV17A0A0B4J275 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRAV17A0A0B4J275 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TRAV17A0A0B4J275 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRAV17A0A0B4J275 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC19.78■□□□□ 0.76
TRAV17A0A0B4J275 AC092068.2-201ENST00000590491 1708 ntBASIC19.78■□□□□ 0.76
TRAV17A0A0B4J275 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRAV17A0A0B4J275 KRT87P-202ENST00000534226 1464 ntBASIC19.78■□□□□ 0.76
TRAV17A0A0B4J275 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.78■□□□□ 0.76
TRAV17A0A0B4J275 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
TRAV17A0A0B4J275 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRAV17A0A0B4J275 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRAV17A0A0B4J275 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC19.77■□□□□ 0.76
TRAV17A0A0B4J275 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRAV17A0A0B4J275 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRAV17A0A0B4J275 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
TRAV17A0A0B4J275 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TRAV17A0A0B4J275 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.77■□□□□ 0.76
TRAV17A0A0B4J275 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC19.77■□□□□ 0.76
TRAV17A0A0B4J275 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
TRAV17A0A0B4J275 GXYLT1P5-201ENST00000614548 1189 ntBASIC19.77■□□□□ 0.76
TRAV17A0A0B4J275 MDK-213ENST00000617138 635 ntTSL 2 BASIC19.77■□□□□ 0.76
TRAV17A0A0B4J275 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TRAV17A0A0B4J275 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TRAV17A0A0B4J275 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.77■□□□□ 0.75
TRAV17A0A0B4J275 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRAV17A0A0B4J275 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.76■□□□□ 0.75
TRAV17A0A0B4J275 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRAV17A0A0B4J275 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRAV17A0A0B4J275 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.76■□□□□ 0.75
TRAV17A0A0B4J275 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TRAV17A0A0B4J275 AC006970.2-201ENST00000450065 779 ntBASIC19.76■□□□□ 0.75
TRAV17A0A0B4J275 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC19.76■□□□□ 0.75
TRAV17A0A0B4J275 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.76■□□□□ 0.75
TRAV17A0A0B4J275 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.76■□□□□ 0.75
TRAV17A0A0B4J275 AC011767.1-201ENST00000617410 1153 ntBASIC19.76■□□□□ 0.75
TRAV17A0A0B4J275 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
TRAV17A0A0B4J275 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRAV17A0A0B4J275 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.76■□□□□ 0.75
TRAV17A0A0B4J275 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
TRAV17A0A0B4J275 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRAV17A0A0B4J275 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRAV17A0A0B4J275 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRAV17A0A0B4J275 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRAV17A0A0B4J275 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRAV17A0A0B4J275 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.75■□□□□ 0.75
TRAV17A0A0B4J275 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRAV17A0A0B4J275 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC19.75■□□□□ 0.75
TRAV17A0A0B4J275 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC19.75■□□□□ 0.75
TRAV17A0A0B4J275 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRAV17A0A0B4J275 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRAV17A0A0B4J275 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRAV17A0A0B4J275 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
TRAV17A0A0B4J275 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRAV17A0A0B4J275 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRAV17A0A0B4J275 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC19.74■□□□□ 0.75
TRAV17A0A0B4J275 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.74■□□□□ 0.75
TRAV17A0A0B4J275 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
TRAV17A0A0B4J275 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms