Protein–RNA interactions for Protein: A0A0A6YYK7

TRAV19, T-cell receptor alpha variable 19 (Fragment), humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV19A0A0A6YYK7 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
TRAV19A0A0A6YYK7 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC22.6■■□□□ 1.21
TRAV19A0A0A6YYK7 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC22.6■■□□□ 1.21
TRAV19A0A0A6YYK7 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC22.6■■□□□ 1.21
TRAV19A0A0A6YYK7 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC22.6■■□□□ 1.21
TRAV19A0A0A6YYK7 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC22.6■■□□□ 1.21
TRAV19A0A0A6YYK7 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
TRAV19A0A0A6YYK7 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
TRAV19A0A0A6YYK7 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC22.6■■□□□ 1.21
TRAV19A0A0A6YYK7 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC22.59■■□□□ 1.21
TRAV19A0A0A6YYK7 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
TRAV19A0A0A6YYK7 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
TRAV19A0A0A6YYK7 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
TRAV19A0A0A6YYK7 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
TRAV19A0A0A6YYK7 AC016769.1-201ENST00000409132 1010 ntBASIC22.59■■□□□ 1.21
TRAV19A0A0A6YYK7 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
TRAV19A0A0A6YYK7 AC137761.2-201ENST00000561729 223 ntBASIC22.59■■□□□ 1.21
TRAV19A0A0A6YYK7 AC145350.3-201ENST00000569033 163 ntBASIC22.59■■□□□ 1.21
TRAV19A0A0A6YYK7 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
TRAV19A0A0A6YYK7 CPT2-209ENST00000636935 803 ntTSL 5 BASIC22.59■■□□□ 1.21
TRAV19A0A0A6YYK7 LINC01960-201ENST00000563759 1884 ntBASIC22.59■■□□□ 1.21
TRAV19A0A0A6YYK7 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
TRAV19A0A0A6YYK7 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
TRAV19A0A0A6YYK7 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
TRAV19A0A0A6YYK7 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC22.58■■□□□ 1.21
TRAV19A0A0A6YYK7 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC22.58■■□□□ 1.21
TRAV19A0A0A6YYK7 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC22.58■■□□□ 1.21
TRAV19A0A0A6YYK7 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
TRAV19A0A0A6YYK7 VPS53-216ENST00000574029 585 ntTSL 4 BASIC22.58■■□□□ 1.21
TRAV19A0A0A6YYK7 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC22.58■■□□□ 1.21
TRAV19A0A0A6YYK7 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
TRAV19A0A0A6YYK7 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
TRAV19A0A0A6YYK7 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC22.58■■□□□ 1.2
TRAV19A0A0A6YYK7 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TRAV19A0A0A6YYK7 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TRAV19A0A0A6YYK7 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
TRAV19A0A0A6YYK7 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TRAV19A0A0A6YYK7 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TRAV19A0A0A6YYK7 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TRAV19A0A0A6YYK7 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
TRAV19A0A0A6YYK7 AC079140.4-201ENST00000507448 529 ntBASIC22.57■■□□□ 1.2
TRAV19A0A0A6YYK7 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC22.57■■□□□ 1.2
TRAV19A0A0A6YYK7 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
TRAV19A0A0A6YYK7 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
TRAV19A0A0A6YYK7 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
TRAV19A0A0A6YYK7 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC22.56■■□□□ 1.2
TRAV19A0A0A6YYK7 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
TRAV19A0A0A6YYK7 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
TRAV19A0A0A6YYK7 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC22.56■■□□□ 1.2
TRAV19A0A0A6YYK7 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
TRAV19A0A0A6YYK7 KRT19P1-201ENST00000405746 1186 ntBASIC22.56■■□□□ 1.2
TRAV19A0A0A6YYK7 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC22.56■■□□□ 1.2
TRAV19A0A0A6YYK7 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC22.56■■□□□ 1.2
TRAV19A0A0A6YYK7 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
TRAV19A0A0A6YYK7 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
TRAV19A0A0A6YYK7 AC009237.3-201ENST00000393279 1427 ntBASIC22.56■■□□□ 1.2
TRAV19A0A0A6YYK7 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TRAV19A0A0A6YYK7 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TRAV19A0A0A6YYK7 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TRAV19A0A0A6YYK7 AC006015.1-201ENST00000429970 570 ntBASIC22.55■■□□□ 1.2
TRAV19A0A0A6YYK7 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC22.55■■□□□ 1.2
TRAV19A0A0A6YYK7 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
TRAV19A0A0A6YYK7 DBI-210ENST00000542275 757 ntTSL 5 BASIC22.55■■□□□ 1.2
TRAV19A0A0A6YYK7 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
TRAV19A0A0A6YYK7 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
TRAV19A0A0A6YYK7 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC22.54■■□□□ 1.2
TRAV19A0A0A6YYK7 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC22.54■■□□□ 1.2
TRAV19A0A0A6YYK7 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
TRAV19A0A0A6YYK7 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
TRAV19A0A0A6YYK7 STX7-201ENST00000367937 1090 ntTSL 5 BASIC22.54■■□□□ 1.2
TRAV19A0A0A6YYK7 AC079089.2-201ENST00000531211 1277 ntBASIC22.54■■□□□ 1.2
TRAV19A0A0A6YYK7 TESC-206ENST00000541210 936 ntTSL 3 BASIC22.54■■□□□ 1.2
TRAV19A0A0A6YYK7 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
TRAV19A0A0A6YYK7 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
TRAV19A0A0A6YYK7 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC22.54■■□□□ 1.2
TRAV19A0A0A6YYK7 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TRAV19A0A0A6YYK7 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC22.54■■□□□ 1.2
TRAV19A0A0A6YYK7 AC005224.4-201ENST00000583262 1652 ntBASIC22.54■■□□□ 1.2
TRAV19A0A0A6YYK7 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
TRAV19A0A0A6YYK7 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
TRAV19A0A0A6YYK7 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
TRAV19A0A0A6YYK7 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
TRAV19A0A0A6YYK7 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
TRAV19A0A0A6YYK7 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
TRAV19A0A0A6YYK7 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC22.53■■□□□ 1.2
TRAV19A0A0A6YYK7 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
TRAV19A0A0A6YYK7 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC22.53■■□□□ 1.2
TRAV19A0A0A6YYK7 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
TRAV19A0A0A6YYK7 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
TRAV19A0A0A6YYK7 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
TRAV19A0A0A6YYK7 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
TRAV19A0A0A6YYK7 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC22.53■■□□□ 1.2
TRAV19A0A0A6YYK7 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
TRAV19A0A0A6YYK7 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC22.53■■□□□ 1.2
TRAV19A0A0A6YYK7 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
TRAV19A0A0A6YYK7 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
TRAV19A0A0A6YYK7 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
TRAV19A0A0A6YYK7 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC22.52■■□□□ 1.2
TRAV19A0A0A6YYK7 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC22.52■■□□□ 1.2
TRAV19A0A0A6YYK7 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms