Protein–RNA interactions for Protein: A0A0A6YYK6

TRAV16, T-cell receptor alpha variable 16 (Fragment), humanhuman

Predicted RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV16A0A0A6YYK6 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
TRAV16A0A0A6YYK6 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV16A0A0A6YYK6 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV16A0A0A6YYK6 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
TRAV16A0A0A6YYK6 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV16A0A0A6YYK6 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV16A0A0A6YYK6 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC15.09■□□□□ 0.01
TRAV16A0A0A6YYK6 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC15.09■□□□□ 0.01
TRAV16A0A0A6YYK6 KRT125P-201ENST00000546827 989 ntBASIC15.09■□□□□ 0.01
TRAV16A0A0A6YYK6 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC15.09■□□□□ 0.01
TRAV16A0A0A6YYK6 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV16A0A0A6YYK6 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC15.09■□□□□ 0.01
TRAV16A0A0A6YYK6 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC15.09■□□□□ 0.01
TRAV16A0A0A6YYK6 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC15.09■□□□□ 0.01
TRAV16A0A0A6YYK6 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV16A0A0A6YYK6 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV16A0A0A6YYK6 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC15.09■□□□□ 0.01
TRAV16A0A0A6YYK6 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV16A0A0A6YYK6 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV16A0A0A6YYK6 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV16A0A0A6YYK6 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV16A0A0A6YYK6 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
TRAV16A0A0A6YYK6 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
TRAV16A0A0A6YYK6 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
TRAV16A0A0A6YYK6 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
TRAV16A0A0A6YYK6 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
TRAV16A0A0A6YYK6 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC15.08■□□□□ 0.01
TRAV16A0A0A6YYK6 COMT-203ENST00000403184 2217 ntTSL 2 BASIC15.08■□□□□ 0
TRAV16A0A0A6YYK6 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV16A0A0A6YYK6 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC15.08■□□□□ 0
TRAV16A0A0A6YYK6 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV16A0A0A6YYK6 LSM7-203ENST00000585409 512 ntTSL 2 BASIC15.08■□□□□ 0
TRAV16A0A0A6YYK6 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC15.08■□□□□ 0
TRAV16A0A0A6YYK6 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV16A0A0A6YYK6 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC15.08■□□□□ 0
TRAV16A0A0A6YYK6 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
TRAV16A0A0A6YYK6 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
TRAV16A0A0A6YYK6 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC15.08■□□□□ 0
TRAV16A0A0A6YYK6 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV16A0A0A6YYK6 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
TRAV16A0A0A6YYK6 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV16A0A0A6YYK6 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRAV16A0A0A6YYK6 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV16A0A0A6YYK6 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV16A0A0A6YYK6 AL022069.1-201ENST00000568025 1636 ntBASIC15.07■□□□□ 0
TRAV16A0A0A6YYK6 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV16A0A0A6YYK6 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRAV16A0A0A6YYK6 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV16A0A0A6YYK6 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRAV16A0A0A6YYK6 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRAV16A0A0A6YYK6 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC15.07■□□□□ 0
TRAV16A0A0A6YYK6 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
TRAV16A0A0A6YYK6 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV16A0A0A6YYK6 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRAV16A0A0A6YYK6 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
TRAV16A0A0A6YYK6 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC15.07■□□□□ 0
TRAV16A0A0A6YYK6 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV16A0A0A6YYK6 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC15.07■□□□□ 0
TRAV16A0A0A6YYK6 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV16A0A0A6YYK6 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC15.06■□□□□ 0
TRAV16A0A0A6YYK6 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV16A0A0A6YYK6 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV16A0A0A6YYK6 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV16A0A0A6YYK6 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRAV16A0A0A6YYK6 RNF146-205ENST00000477776 762 ntTSL 3 BASIC15.06■□□□□ 0
TRAV16A0A0A6YYK6 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV16A0A0A6YYK6 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC15.06■□□□□ 0
TRAV16A0A0A6YYK6 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRAV16A0A0A6YYK6 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV16A0A0A6YYK6 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC15.06■□□□□ 0
TRAV16A0A0A6YYK6 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC15.06■□□□□ 0
TRAV16A0A0A6YYK6 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV16A0A0A6YYK6 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC15.06■□□□□ 0
TRAV16A0A0A6YYK6 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
TRAV16A0A0A6YYK6 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
TRAV16A0A0A6YYK6 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
TRAV16A0A0A6YYK6 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC15.05■□□□□ 0
TRAV16A0A0A6YYK6 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
TRAV16A0A0A6YYK6 AC026310.3-201ENST00000625186 2373 ntBASIC15.05■□□□□ 0
TRAV16A0A0A6YYK6 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
TRAV16A0A0A6YYK6 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRAV16A0A0A6YYK6 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
TRAV16A0A0A6YYK6 Z92544.1-202ENST00000571933 1220 ntBASIC15.05■□□□□ -0
TRAV16A0A0A6YYK6 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC15.05■□□□□ -0
TRAV16A0A0A6YYK6 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC15.05■□□□□ -0
TRAV16A0A0A6YYK6 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
TRAV16A0A0A6YYK6 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
TRAV16A0A0A6YYK6 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC15.05■□□□□ -0
TRAV16A0A0A6YYK6 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRAV16A0A0A6YYK6 RNF165-205ENST00000588679 2904 ntBASIC15.05■□□□□ -0
TRAV16A0A0A6YYK6 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRAV16A0A0A6YYK6 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ -0
TRAV16A0A0A6YYK6 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRAV16A0A0A6YYK6 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
TRAV16A0A0A6YYK6 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV16A0A0A6YYK6 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC15.04■□□□□ -0
TRAV16A0A0A6YYK6 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV16A0A0A6YYK6 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV16A0A0A6YYK6 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV16A0A0A6YYK6 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 170.6 ms