Protein–RNA interactions for Protein: A0A0A6YYJ0

MSANTD3-TMEFF1, Protein MSANTD3-TMEFF1, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSANTD3-TMEFF1A0A0A6YYJ0 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC21.63■■□□□ 1.05
MSANTD3-TMEFF1A0A0A6YYJ0 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
MSANTD3-TMEFF1A0A0A6YYJ0 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC21.63■■□□□ 1.05
MSANTD3-TMEFF1A0A0A6YYJ0 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
MSANTD3-TMEFF1A0A0A6YYJ0 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
MSANTD3-TMEFF1A0A0A6YYJ0 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC21.63■■□□□ 1.05
MSANTD3-TMEFF1A0A0A6YYJ0 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
MSANTD3-TMEFF1A0A0A6YYJ0 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
MSANTD3-TMEFF1A0A0A6YYJ0 PARP1-202ENST00000366792 553 ntTSL 3 BASIC21.63■■□□□ 1.05
MSANTD3-TMEFF1A0A0A6YYJ0 TSPY6P-201ENST00000448518 926 ntBASIC21.63■■□□□ 1.05
MSANTD3-TMEFF1A0A0A6YYJ0 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC21.63■■□□□ 1.05
MSANTD3-TMEFF1A0A0A6YYJ0 DUX4L16-201ENST00000555130 1264 ntBASIC21.63■■□□□ 1.05
MSANTD3-TMEFF1A0A0A6YYJ0 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC21.63■■□□□ 1.05
MSANTD3-TMEFF1A0A0A6YYJ0 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
MSANTD3-TMEFF1A0A0A6YYJ0 AC231657.2-201ENST00000624556 255 ntBASIC21.63■■□□□ 1.05
MSANTD3-TMEFF1A0A0A6YYJ0 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
MSANTD3-TMEFF1A0A0A6YYJ0 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21.63■■□□□ 1.05
MSANTD3-TMEFF1A0A0A6YYJ0 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
MSANTD3-TMEFF1A0A0A6YYJ0 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.62■■□□□ 1.05
MSANTD3-TMEFF1A0A0A6YYJ0 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
MSANTD3-TMEFF1A0A0A6YYJ0 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
MSANTD3-TMEFF1A0A0A6YYJ0 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
MSANTD3-TMEFF1A0A0A6YYJ0 AC007322.1-201ENST00000426983 750 ntBASIC21.62■■□□□ 1.05
MSANTD3-TMEFF1A0A0A6YYJ0 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
MSANTD3-TMEFF1A0A0A6YYJ0 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
MSANTD3-TMEFF1A0A0A6YYJ0 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC21.62■■□□□ 1.05
MSANTD3-TMEFF1A0A0A6YYJ0 UBE2DNL-204ENST00000602536 740 ntBASIC21.62■■□□□ 1.05
MSANTD3-TMEFF1A0A0A6YYJ0 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC21.62■■□□□ 1.05
MSANTD3-TMEFF1A0A0A6YYJ0 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC21.62■■□□□ 1.05
MSANTD3-TMEFF1A0A0A6YYJ0 AC020928.2-201ENST00000588717 2197 ntBASIC21.62■■□□□ 1.05
MSANTD3-TMEFF1A0A0A6YYJ0 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC21.61■■□□□ 1.05
MSANTD3-TMEFF1A0A0A6YYJ0 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC21.61■■□□□ 1.05
MSANTD3-TMEFF1A0A0A6YYJ0 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
MSANTD3-TMEFF1A0A0A6YYJ0 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
MSANTD3-TMEFF1A0A0A6YYJ0 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
MSANTD3-TMEFF1A0A0A6YYJ0 AC005181.1-201ENST00000604782 1256 ntBASIC21.61■■□□□ 1.05
MSANTD3-TMEFF1A0A0A6YYJ0 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
MSANTD3-TMEFF1A0A0A6YYJ0 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
MSANTD3-TMEFF1A0A0A6YYJ0 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
MSANTD3-TMEFF1A0A0A6YYJ0 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
MSANTD3-TMEFF1A0A0A6YYJ0 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC21.6■■□□□ 1.05
MSANTD3-TMEFF1A0A0A6YYJ0 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
MSANTD3-TMEFF1A0A0A6YYJ0 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
MSANTD3-TMEFF1A0A0A6YYJ0 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC21.6■■□□□ 1.05
MSANTD3-TMEFF1A0A0A6YYJ0 ABCB10P4-201ENST00000566803 2184 ntBASIC21.6■■□□□ 1.05
MSANTD3-TMEFF1A0A0A6YYJ0 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
MSANTD3-TMEFF1A0A0A6YYJ0 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
MSANTD3-TMEFF1A0A0A6YYJ0 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
MSANTD3-TMEFF1A0A0A6YYJ0 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
MSANTD3-TMEFF1A0A0A6YYJ0 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
MSANTD3-TMEFF1A0A0A6YYJ0 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
MSANTD3-TMEFF1A0A0A6YYJ0 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC21.6■■□□□ 1.05
MSANTD3-TMEFF1A0A0A6YYJ0 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC21.6■■□□□ 1.05
MSANTD3-TMEFF1A0A0A6YYJ0 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC21.6■■□□□ 1.05
MSANTD3-TMEFF1A0A0A6YYJ0 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
MSANTD3-TMEFF1A0A0A6YYJ0 PXK-203ENST00000383715 1756 ntTSL 5 BASIC21.6■■□□□ 1.05
MSANTD3-TMEFF1A0A0A6YYJ0 AC009237.3-201ENST00000393279 1427 ntBASIC21.6■■□□□ 1.05
MSANTD3-TMEFF1A0A0A6YYJ0 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
MSANTD3-TMEFF1A0A0A6YYJ0 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
MSANTD3-TMEFF1A0A0A6YYJ0 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
MSANTD3-TMEFF1A0A0A6YYJ0 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.59■■□□□ 1.05
MSANTD3-TMEFF1A0A0A6YYJ0 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
MSANTD3-TMEFF1A0A0A6YYJ0 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
MSANTD3-TMEFF1A0A0A6YYJ0 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
MSANTD3-TMEFF1A0A0A6YYJ0 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
MSANTD3-TMEFF1A0A0A6YYJ0 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC21.59■■□□□ 1.05
MSANTD3-TMEFF1A0A0A6YYJ0 AL138781.1-201ENST00000566567 1274 ntBASIC21.59■■□□□ 1.05
MSANTD3-TMEFF1A0A0A6YYJ0 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC21.59■■□□□ 1.05
MSANTD3-TMEFF1A0A0A6YYJ0 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC21.59■■□□□ 1.05
MSANTD3-TMEFF1A0A0A6YYJ0 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC21.59■■□□□ 1.05
MSANTD3-TMEFF1A0A0A6YYJ0 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
MSANTD3-TMEFF1A0A0A6YYJ0 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC21.59■■□□□ 1.05
MSANTD3-TMEFF1A0A0A6YYJ0 DUSP8P3-201ENST00000399571 1760 ntBASIC21.59■■□□□ 1.05
MSANTD3-TMEFF1A0A0A6YYJ0 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
MSANTD3-TMEFF1A0A0A6YYJ0 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
MSANTD3-TMEFF1A0A0A6YYJ0 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
MSANTD3-TMEFF1A0A0A6YYJ0 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
MSANTD3-TMEFF1A0A0A6YYJ0 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.05
MSANTD3-TMEFF1A0A0A6YYJ0 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
MSANTD3-TMEFF1A0A0A6YYJ0 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC21.58■■□□□ 1.05
MSANTD3-TMEFF1A0A0A6YYJ0 METTL15-202ENST00000403099 795 ntTSL 5 BASIC21.58■■□□□ 1.05
MSANTD3-TMEFF1A0A0A6YYJ0 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
MSANTD3-TMEFF1A0A0A6YYJ0 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC21.58■■□□□ 1.05
MSANTD3-TMEFF1A0A0A6YYJ0 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC21.58■■□□□ 1.05
MSANTD3-TMEFF1A0A0A6YYJ0 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC21.58■■□□□ 1.05
MSANTD3-TMEFF1A0A0A6YYJ0 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC21.58■■□□□ 1.05
MSANTD3-TMEFF1A0A0A6YYJ0 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
MSANTD3-TMEFF1A0A0A6YYJ0 SLC7A5P2-201ENST00000553010 536 ntBASIC21.58■■□□□ 1.05
MSANTD3-TMEFF1A0A0A6YYJ0 KRT18P6-201ENST00000555540 1265 ntBASIC21.58■■□□□ 1.05
MSANTD3-TMEFF1A0A0A6YYJ0 KLF13-207ENST00000560473 489 ntTSL 3 BASIC21.58■■□□□ 1.05
MSANTD3-TMEFF1A0A0A6YYJ0 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
MSANTD3-TMEFF1A0A0A6YYJ0 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
MSANTD3-TMEFF1A0A0A6YYJ0 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
MSANTD3-TMEFF1A0A0A6YYJ0 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.57■■□□□ 1.04
MSANTD3-TMEFF1A0A0A6YYJ0 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
MSANTD3-TMEFF1A0A0A6YYJ0 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
MSANTD3-TMEFF1A0A0A6YYJ0 GUSBP6-202ENST00000438529 1198 ntBASIC21.57■■□□□ 1.04
MSANTD3-TMEFF1A0A0A6YYJ0 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC21.57■■□□□ 1.04
MSANTD3-TMEFF1A0A0A6YYJ0 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC21.57■■□□□ 1.04
MSANTD3-TMEFF1A0A0A6YYJ0 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms