Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 NDUFA10-201ENST00000252711 4915 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
LMO3Q8TAP4 SIGLEC11-203ENST00000447370 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LMO3Q8TAP4 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
LMO3Q8TAP4 LINC01149-202ENST00000430364 2141 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LMO3Q8TAP4 MYNN-201ENST00000349841 4999 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LMO3Q8TAP4 TRIB1-202ENST00000519576 1409 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LMO3Q8TAP4 DQX1-202ENST00000404568 2689 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
LMO3Q8TAP4 CYP26B1-205ENST00000546307 4331 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LMO3Q8TAP4 PACRG-AS1-201ENST00000626335 2192 ntTSL 2 BASIC13.33□□□□□ -0.28
LMO3Q8TAP4 CRYGD-201ENST00000264376 619 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LMO3Q8TAP4 CELA3A-201ENST00000290122 887 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LMO3Q8TAP4 NDUFB8-203ENST00000370322 713 ntTSL 2 BASIC13.33□□□□□ -0.28
LMO3Q8TAP4 SNAPC5-203ENST00000395589 749 ntAPPRIS P2 TSL 2 BASIC13.33□□□□□ -0.28
LMO3Q8TAP4 PGAM1P4-201ENST00000397343 750 ntBASIC13.33□□□□□ -0.28
LMO3Q8TAP4 AL138885.2-201ENST00000420389 539 ntTSL 3 BASIC13.33□□□□□ -0.28
LMO3Q8TAP4 AL157832.2-206ENST00000428178 601 ntTSL 3 BASIC13.33□□□□□ -0.28
LMO3Q8TAP4 AL663070.1-201ENST00000438210 725 ntBASIC13.33□□□□□ -0.28
LMO3Q8TAP4 TTTY18-201ENST00000438677 221 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LMO3Q8TAP4 RPL38-202ENST00000439590 431 ntAPPRIS P2 TSL 2 BASIC13.33□□□□□ -0.28
LMO3Q8TAP4 LIFR-AS1-201ENST00000500733 3803 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LMO3Q8TAP4 SMIM15-202ENST00000507416 584 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
LMO3Q8TAP4 AC138409.2-203ENST00000508395 553 ntTSL 4 BASIC13.33□□□□□ -0.28
LMO3Q8TAP4 AC008808.2-201ENST00000510349 569 ntTSL 3 BASIC13.33□□□□□ -0.28
LMO3Q8TAP4 MBP-230ENST00000528160 584 ntTSL 5 BASIC13.33□□□□□ -0.28
LMO3Q8TAP4 FTH1-205ENST00000529631 507 ntTSL 4 BASIC13.33□□□□□ -0.28
LMO3Q8TAP4 IMMP1L-213ENST00000533642 314 ntTSL 2 BASIC13.33□□□□□ -0.28
LMO3Q8TAP4 RPLP0-205ENST00000546989 993 ntTSL 5 BASIC13.33□□□□□ -0.28
LMO3Q8TAP4 AC044802.2-201ENST00000551187 434 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LMO3Q8TAP4 SNAPC5-205ENST00000563480 920 ntAPPRIS P2 TSL 2 BASIC13.33□□□□□ -0.28
LMO3Q8TAP4 AC015911.7-201ENST00000587542 958 ntBASIC13.33□□□□□ -0.28
LMO3Q8TAP4 KXD1-210ENST00000599000 498 ntTSL 2 BASIC13.33□□□□□ -0.28
LMO3Q8TAP4 IFITM2-205ENST00000602569 605 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
LMO3Q8TAP4 BX322562.1-201ENST00000617004 561 ntBASIC13.33□□□□□ -0.28
LMO3Q8TAP4 AC087163.3-201ENST00000624345 700 ntBASIC13.33□□□□□ -0.28
LMO3Q8TAP4 AC008993.3-201ENST00000633603 631 ntTSL 5 BASIC13.33□□□□□ -0.28
LMO3Q8TAP4 FURIN-208ENST00000640725 224 ntTSL 5 BASIC13.33□□□□□ -0.28
LMO3Q8TAP4 METAP2-201ENST00000261220 1836 ntTSL 2 BASIC13.33□□□□□ -0.28
LMO3Q8TAP4 MAGEA11-201ENST00000333104 1845 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
LMO3Q8TAP4 FKBP9P1-201ENST00000441699 1491 ntBASIC13.33□□□□□ -0.28
LMO3Q8TAP4 DDX6P2-201ENST00000619520 1455 ntBASIC13.33□□□□□ -0.28
LMO3Q8TAP4 ZNF530-201ENST00000332854 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LMO3Q8TAP4 TRHDE-AS1-202ENST00000435350 2966 ntTSL 2 BASIC13.33□□□□□ -0.28
LMO3Q8TAP4 GRIP2-206ENST00000637182 3727 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
LMO3Q8TAP4 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
LMO3Q8TAP4 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LMO3Q8TAP4 SEC31A-202ENST00000311785 3909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
LMO3Q8TAP4 BCAR3-203ENST00000370244 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LMO3Q8TAP4 PDE6B-212ENST00000496514 3232 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
LMO3Q8TAP4 CARS-201ENST00000278224 2491 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LMO3Q8TAP4 HTR2C-201ENST00000276198 4751 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LMO3Q8TAP4 RAB43-204ENST00000393307 4203 ntAPPRIS P1 TSL 4 BASIC13.33□□□□□ -0.28
LMO3Q8TAP4 TMCO1-202ENST00000392129 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LMO3Q8TAP4 PRPSAP2-228ENST00000610773 1905 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LMO3Q8TAP4 ZNF519-206ENST00000589498 2117 ntTSL 2 BASIC13.33□□□□□ -0.28
LMO3Q8TAP4 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LMO3Q8TAP4 TAS1R2-201ENST00000375371 2542 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
LMO3Q8TAP4 SCML1-204ENST00000398080 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
LMO3Q8TAP4 YWHAB-202ENST00000372839 3109 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LMO3Q8TAP4 ETV5-201ENST00000306376 4111 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LMO3Q8TAP4 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
LMO3Q8TAP4 ARMC8-221ENST00000491704 2777 ntTSL 5 BASIC13.32□□□□□ -0.28
LMO3Q8TAP4 AC135050.1-201ENST00000622229 3380 ntTSL 2 BASIC13.32□□□□□ -0.28
LMO3Q8TAP4 WDR81-201ENST00000309182 3808 ntTSL 2 BASIC13.32□□□□□ -0.28
LMO3Q8TAP4 EPB41L1-206ENST00000373950 3631 ntTSL 5 BASIC13.32□□□□□ -0.28
LMO3Q8TAP4 CACNA1D-228ENST00000638120 1830 ntTSL 2 BASIC13.32□□□□□ -0.28
LMO3Q8TAP4 ROPN1-201ENST00000184183 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LMO3Q8TAP4 DNMT1-203ENST00000540357 4916 ntTSL 5 BASIC13.32□□□□□ -0.28
LMO3Q8TAP4 NFXL1-201ENST00000329043 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LMO3Q8TAP4 AL359918.1-201ENST00000451892 2720 ntBASIC13.32□□□□□ -0.28
LMO3Q8TAP4 AKNA-201ENST00000223791 4414 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
LMO3Q8TAP4 ANP32B-201ENST00000339399 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LMO3Q8TAP4 EDF1-201ENST00000224073 640 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LMO3Q8TAP4 PHACTR1-203ENST00000379335 943 ntTSL 2 BASIC13.32□□□□□ -0.28
LMO3Q8TAP4 CST13P-202ENST00000400563 1157 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LMO3Q8TAP4 TXNRD3NB-201ENST00000404489 738 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LMO3Q8TAP4 RNA5SP407-201ENST00000410275 110 ntBASIC13.32□□□□□ -0.28
LMO3Q8TAP4 PHBP11-201ENST00000420550 809 ntBASIC13.32□□□□□ -0.28
LMO3Q8TAP4 HTR3D-203ENST00000428798 1215 ntTSL 5 BASIC13.32□□□□□ -0.28
LMO3Q8TAP4 RRM2P2-201ENST00000436212 652 ntBASIC13.32□□□□□ -0.28
LMO3Q8TAP4 HTR3D-204ENST00000453435 1043 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LMO3Q8TAP4 AK2-206ENST00000480134 811 ntTSL 2 BASIC13.32□□□□□ -0.28
LMO3Q8TAP4 SCOC-209ENST00000512749 841 ntAPPRIS ALT1 TSL 3 BASIC13.32□□□□□ -0.28
LMO3Q8TAP4 AP001266.1-201ENST00000531155 1044 ntTSL 2 BASIC13.32□□□□□ -0.28
LMO3Q8TAP4 AL121790.2-202ENST00000556024 363 ntTSL 5 BASIC13.32□□□□□ -0.28
LMO3Q8TAP4 Z92544.2-202ENST00000566927 407 ntTSL 3 BASIC13.32□□□□□ -0.28
LMO3Q8TAP4 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC13.32□□□□□ -0.28
LMO3Q8TAP4 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC13.32□□□□□ -0.28
LMO3Q8TAP4 AC005786.2-201ENST00000592368 369 ntTSL 3 BASIC13.32□□□□□ -0.28
LMO3Q8TAP4 GALNTL6-207ENST00000616459 1254 ntTSL 5 BASIC13.32□□□□□ -0.28
LMO3Q8TAP4 AL606763.1-201ENST00000629535 462 ntTSL 3 BASIC13.32□□□□□ -0.28
LMO3Q8TAP4 TBC1D8-201ENST00000376840 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LMO3Q8TAP4 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
LMO3Q8TAP4 POTEH-201ENST00000343518 1928 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
LMO3Q8TAP4 OLFML3-202ENST00000369551 1934 ntTSL 2 BASIC13.32□□□□□ -0.28
LMO3Q8TAP4 DDR1-238ENST00000446312 3202 ntTSL 5 BASIC13.32□□□□□ -0.28
LMO3Q8TAP4 MATR3-237ENST00000509990 3249 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
LMO3Q8TAP4 AL353608.3-202ENST00000429953 4384 ntTSL 5 BASIC13.32□□□□□ -0.28
LMO3Q8TAP4 PCDHGA5-201ENST00000518069 4602 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LMO3Q8TAP4 JRKL-201ENST00000332349 2855 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
LMO3Q8TAP4 LILRB3-202ENST00000346401 2204 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms