Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 PNPLA6-220ENST00000600737 4195 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
NPIPA3F8WFD2 ZKSCAN1-202ENST00000426572 2011 ntTSL 2 BASIC11.62□□□□□ -0.55
NPIPA3F8WFD2 MED27-201ENST00000292035 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
NPIPA3F8WFD2 UBL7-206ENST00000565335 1414 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
NPIPA3F8WFD2 DIP2C-205ENST00000634311 4961 ntTSL 5 BASIC11.62□□□□□ -0.55
NPIPA3F8WFD2 SPAG8-201ENST00000340291 1759 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
NPIPA3F8WFD2 ELN-201ENST00000252034 3781 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
NPIPA3F8WFD2 SUPV3L1-201ENST00000359655 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
NPIPA3F8WFD2 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
NPIPA3F8WFD2 TFDP2-215ENST00000489671 9857 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
NPIPA3F8WFD2 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
NPIPA3F8WFD2 MEFV-209ENST00000541159 1888 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
NPIPA3F8WFD2 NTRK3-204ENST00000360948 3004 ntTSL 5 BASIC11.62□□□□□ -0.55
NPIPA3F8WFD2 TOP1MT-213ENST00000521193 1960 ntTSL 2 BASIC11.62□□□□□ -0.55
NPIPA3F8WFD2 DAP3-201ENST00000343043 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
NPIPA3F8WFD2 RNASE8-201ENST00000308227 634 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
NPIPA3F8WFD2 AL031577.1-201ENST00000339867 399 ntBASIC11.62□□□□□ -0.55
NPIPA3F8WFD2 BNIP1-203ENST00000352523 1143 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
NPIPA3F8WFD2 PPP1R7-205ENST00000404405 1009 ntTSL 3 BASIC11.62□□□□□ -0.55
NPIPA3F8WFD2 TACR1-202ENST00000409848 1270 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
NPIPA3F8WFD2 AC102953.1-201ENST00000445345 498 ntTSL 2 BASIC11.62□□□□□ -0.55
NPIPA3F8WFD2 AC009312.1-201ENST00000457110 592 ntTSL 4 BASIC11.62□□□□□ -0.55
NPIPA3F8WFD2 TGFBI-207ENST00000508076 1034 ntTSL 2 BASIC11.62□□□□□ -0.55
NPIPA3F8WFD2 AC092435.2-201ENST00000515530 524 ntTSL 4 BASIC11.62□□□□□ -0.55
NPIPA3F8WFD2 CHCHD10-204ENST00000520222 384 ntTSL 3 BASIC11.62□□□□□ -0.55
NPIPA3F8WFD2 CETN3-205ENST00000522842 664 ntTSL 2 BASIC11.62□□□□□ -0.55
NPIPA3F8WFD2 COX14-204ENST00000550654 580 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
NPIPA3F8WFD2 AC025219.1-201ENST00000559299 526 ntTSL 4 BASIC11.62□□□□□ -0.55
NPIPA3F8WFD2 Z92544.2-202ENST00000566927 407 ntTSL 3 BASIC11.62□□□□□ -0.55
NPIPA3F8WFD2 DSCR9-203ENST00000581640 472 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
NPIPA3F8WFD2 AC023090.1-201ENST00000592906 502 ntTSL 3 BASIC11.62□□□□□ -0.55
NPIPA3F8WFD2 AC007292.1-201ENST00000594444 746 ntTSL 2 BASIC11.62□□□□□ -0.55
NPIPA3F8WFD2 IFNL3P1-201ENST00000595082 501 ntBASIC11.62□□□□□ -0.55
NPIPA3F8WFD2 EMP3-204ENST00000596315 761 ntTSL 2 BASIC11.62□□□□□ -0.55
NPIPA3F8WFD2 AC092073.1-202ENST00000606020 653 ntTSL 3 BASIC11.62□□□□□ -0.55
NPIPA3F8WFD2 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC11.62□□□□□ -0.55
NPIPA3F8WFD2 RALGDS-203ENST00000372062 3596 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
NPIPA3F8WFD2 ZKSCAN3-201ENST00000252211 4725 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
NPIPA3F8WFD2 COPS7A-201ENST00000229251 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
NPIPA3F8WFD2 AC067852.6-201ENST00000591237 1736 ntBASIC11.62□□□□□ -0.55
NPIPA3F8WFD2 PSMB8-201ENST00000374881 1351 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
NPIPA3F8WFD2 C22orf42-201ENST00000382097 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
NPIPA3F8WFD2 MIR22HG-208ENST00000574306 2626 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
NPIPA3F8WFD2 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
NPIPA3F8WFD2 ATG5-202ENST00000360666 2712 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
NPIPA3F8WFD2 ACOXL-202ENST00000389811 2714 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
NPIPA3F8WFD2 SH3GLB2-206ENST00000417224 1468 ntTSL 5 BASIC11.62□□□□□ -0.55
NPIPA3F8WFD2 IQCB1-202ENST00000349820 1919 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
NPIPA3F8WFD2 IL1RN-204ENST00000409052 1903 ntTSL 5 BASIC11.62□□□□□ -0.55
NPIPA3F8WFD2 PAPLN-203ENST00000554301 4090 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
NPIPA3F8WFD2 PRKAB2-201ENST00000254101 5417 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
NPIPA3F8WFD2 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
NPIPA3F8WFD2 SEMA6D-206ENST00000389428 5874 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
NPIPA3F8WFD2 GIMAP4-202ENST00000461940 1569 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
NPIPA3F8WFD2 CPEB1-212ENST00000616959 2009 ntTSL 2 BASIC11.62□□□□□ -0.55
NPIPA3F8WFD2 MIS12-202ENST00000573759 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
NPIPA3F8WFD2 GNPNAT1-201ENST00000216410 3860 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
NPIPA3F8WFD2 DLGAP2-214ENST00000612087 10088 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
NPIPA3F8WFD2 CCDC117-201ENST00000249064 3985 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
NPIPA3F8WFD2 OXGR1-204ENST00000543457 1305 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
NPIPA3F8WFD2 ABCB9-201ENST00000280560 3517 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
NPIPA3F8WFD2 PCDHB17P-202ENST00000623466 3066 ntBASIC11.61□□□□□ -0.55
NPIPA3F8WFD2 GAS8-201ENST00000268699 3185 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
NPIPA3F8WFD2 UBE2I-202ENST00000355803 3253 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
NPIPA3F8WFD2 CIT-203ENST00000392521 8708 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
NPIPA3F8WFD2 FAM187A-201ENST00000331733 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
NPIPA3F8WFD2 CCDC103-204ENST00000417826 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
NPIPA3F8WFD2 PHF21B-203ENST00000403565 3586 ntTSL 2 BASIC11.61□□□□□ -0.55
NPIPA3F8WFD2 ANO6-203ENST00000425752 3558 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
NPIPA3F8WFD2 PIWIL1-201ENST00000245255 3897 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
NPIPA3F8WFD2 AC133919.3-201ENST00000621407 1804 ntBASIC11.61□□□□□ -0.55
NPIPA3F8WFD2 ZNF799-202ENST00000430385 2583 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
NPIPA3F8WFD2 SPATA18-201ENST00000295213 4396 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
NPIPA3F8WFD2 SLURP1-201ENST00000246515 537 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
NPIPA3F8WFD2 VILL-201ENST00000283713 2970 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
NPIPA3F8WFD2 ATP5H-202ENST00000344546 553 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
NPIPA3F8WFD2 NPLOC4-202ENST00000374747 5538 ntTSL 2 BASIC11.61□□□□□ -0.55
NPIPA3F8WFD2 PARK7-204ENST00000377493 795 ntTSL 2 BASIC11.61□□□□□ -0.55
NPIPA3F8WFD2 RIBC1-203ENST00000414955 1281 ntTSL 2 BASIC11.61□□□□□ -0.55
NPIPA3F8WFD2 AL138885.2-201ENST00000420389 539 ntTSL 3 BASIC11.61□□□□□ -0.55
NPIPA3F8WFD2 LINC01046-201ENST00000443719 405 ntTSL 3 BASIC11.61□□□□□ -0.55
NPIPA3F8WFD2 DEFA8P-201ENST00000457582 285 ntBASIC11.61□□□□□ -0.55
NPIPA3F8WFD2 VAMP2-203ENST00000481878 557 ntAPPRIS ALT1 TSL 2 BASIC11.61□□□□□ -0.55
NPIPA3F8WFD2 AC113391.1-201ENST00000507236 578 ntTSL 4 BASIC11.61□□□□□ -0.55
NPIPA3F8WFD2 AC068858.1-201ENST00000525114 1239 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
NPIPA3F8WFD2 CTBP2P6-201ENST00000526402 1229 ntBASIC11.61□□□□□ -0.55
NPIPA3F8WFD2 FXYD6-208ENST00000529335 708 ntTSL 3 BASIC11.61□□□□□ -0.55
NPIPA3F8WFD2 FTH1-205ENST00000529631 507 ntTSL 4 BASIC11.61□□□□□ -0.55
NPIPA3F8WFD2 AC011603.2-201ENST00000548149 675 ntTSL 3 BASIC11.61□□□□□ -0.55
NPIPA3F8WFD2 AC027682.3-201ENST00000564717 207 ntTSL 5 BASIC11.61□□□□□ -0.55
NPIPA3F8WFD2 AC103876.1-203ENST00000565495 290 ntTSL 5 BASIC11.61□□□□□ -0.55
NPIPA3F8WFD2 DSCAS-201ENST00000581836 553 ntTSL 4 BASIC11.61□□□□□ -0.55
NPIPA3F8WFD2 FTLP5-201ENST00000586853 534 ntBASIC11.61□□□□□ -0.55
NPIPA3F8WFD2 AC023509.4-201ENST00000602306 775 ntBASIC11.61□□□□□ -0.55
NPIPA3F8WFD2 NRSN2-205ENST00000608467 504 ntTSL 5 BASIC11.61□□□□□ -0.55
NPIPA3F8WFD2 PILRB-213ENST00000609309 993 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
NPIPA3F8WFD2 MIR6770-3-201ENST00000616362 60 ntBASIC11.61□□□□□ -0.55
NPIPA3F8WFD2 MIR6770-2-201ENST00000618304 60 ntBASIC11.61□□□□□ -0.55
NPIPA3F8WFD2 MIR6770-1-201ENST00000622248 60 ntBASIC11.61□□□□□ -0.55
NPIPA3F8WFD2 GUCY1B3-204ENST00000505154 2316 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms